DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment tna and miz-1

DIOPT Version :9

Sequence 1:NP_001368945.1 Gene:tna / 39217 FlyBaseID:FBgn0026160 Length:1186 Species:Drosophila melanogaster
Sequence 2:NP_001255512.1 Gene:miz-1 / 3565074 WormBaseID:WBGene00011259 Length:803 Species:Caenorhabditis elegans


Alignment Length:889 Identity:188/889 - (21%)
Similarity:293/889 - (32%) Gaps:275/889 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   363 NGGYPQQAPPSLTQQQQQQQQRRMAPYPHPQMHMAQKRAAAGVGGAGGMYPGNPMQQQQAQMYGN 427
            |||..::|||.......|...:.....|....                  |..|...||.....|
 Worm   111 NGGKRKRAPPKPKDPALQASSQPTGTLPVLTS------------------PSCPQNGQQLPTENN 157

  Fly   428 QQM-HPGSGGG-----VPLPMQAGGAGNGYGRSGPMGVGNGGYGRMSAGNGMGPTGGPVMGPMGP 486
            ..| .|.|..|     ..:||...|:..|:   .|:|.|        |.:..|...||   |..|
 Worm   158 NFMFSPNSSDGSMWPPQGVPMSTPGSSAGH---MPLGAG--------AASFPGQMNGP---PQHP 208

  Fly   487 GGMTAG-------GMGPGPGCMSQQRFMPQ---GSGGGMPGVGYGGVGGAASHQGQFYP--GSGQ 539
            |...:|       |...|...|..||.|.|   |..|.||.                ||  ..||
 Worm   209 GMQYSGQMQQLPYGQMEGNHAMYDQRIMGQRAAGRPGMMPD----------------YPQMPMGQ 257

  Fly   540 SAG--MQQAGGMCPAGPGAVATTGNPYQNQ---------------GFQQNYQHSPVPGNPTPPLT 587
            :.|  |.:.....|:||..:|  |:|:..|               |...|.|...|..:|.|  .
 Worm   258 TPGNTMMRMPVQYPSGPSQMA--GHPHMQQMQYGHMMRAPPVSVYGQMNNAQQYAVTAHPNP--V 318

  Fly   588 PACSVPYVSPNPDIKPPMDNSEEMRLTFPVRDGIILAPFRLLHNLSVSNHVFHLKQNVYNTLMCR 652
            |.   ||..|            |:|..:....|.|:.     ..|....||......|  ..|..
 Worm   319 PQ---PYYHP------------EVRQLYETTAGYIVD-----RELLAEGHVTPGSNGV--EAMLT 361

  Fly   653 NDLELQLKCFHQDDRQMNTNWPHTVTVSAN---ATPLNIERSEKNS-TALRPLYLKAVCQPGRNT 713
            :|....||...|.| .:.:.||.|.:...|   ...:| ::|..|| ..::.:::|.....|.|:
 Worm   362 HDASDFLKVSPQTD-VLFSIWPVTKSNDPNIQYEVYIN-QKSVMNSHMQVKSIFIKDFLISGMNS 424

  Fly   714 LQLTASSCCCSHLFVLQLVHRPSVRQVLQTLHKRNLLPLEHSVQKIKRNLSQPEANAGPDATPQQ 778
            :.:..:.....:.:..:.|.|.||.::.:.|.::.::    ..|::              ||.|:
 Worm   425 IHIVYNGPQQMYKYACEFVTRKSVIELRKILIQKRVI----EGQQL--------------ATQQK 471

  Fly   779 QQ--QQGGGQQCA--KISLKCPITKSRIRLPARGHECKHVQCFDLEAYLMINSERGSWR--CPEC 837
            ||  |....:|..  .:||.|.::|.|:..||:.||||.:  |||..  :||:.:|..|  |..|
 Worm   472 QQYMQMANKRQAGFYPVSLNCVLSKKRMFTPAKHHECKKI--FDLAQ--LINANKGMTRYFCQTC 532

  Fly   838 SKSAITDTLEIDQYIWAILNTLGNSDVDEVIIDSSANWRALQHNGGMPNAPPP--SNVPSNPSGG 900
            :.....:.:..|.::...|.:: .:.|:::|::.:    .:..:|.:.:..|.  .....|.:.|
 Worm   533 NAYFKFEDITADYFLLNFLQSI-PAGVNDLIVEKT----GVVRSGDVEDVKPKRGKKKTDNDANG 592

  Fly   901 SGSNSGNGSVNPTLPVIKQELCDDI-------AKVMSPGSTQLPTWDSAQAMSPYNMHDMNSIAS 958
            :|.......:     ::|||...|:       :.:..|||.. |.|...|:.| ::|...|.:..
 Worm   593 NGIKRIKSEI-----IVKQETFTDMHGRNVPFSPMPMPGSVP-PDWTRLQSPS-FSMQSPNKVQL 650

  Fly   959 GNMMGNGGNTNQHGNRSSYDGFSGNHSDGSGGLPGGDGGVNSLDQLNAMEKSLSDQMPHTPHTPG 1023
            |                                                        |.||.|||
 Worm   651 G--------------------------------------------------------PATPATPG 659

  Fly  1024 AA-SHPMTPGGPPSVSSSHNEPISGGTPN------ANGSGSATNGSGNNNSSTGHNSPQTPGTPS 1081
            .. .:|.:.|...::||.....|.|..|.      ...||||                  |.||.
 Worm   660 MVFQNPASAGSMLNMSSPRQTMIPGMHPMMPPHDVTMRSGSA------------------PYTPE 706

  Fly  1082 RMGGG--------MGGSGSADSQQQQQEQLLNSLMSSQTQLKFSESDLSAELQSFDAAAAAINDT 1138
            .:...        :.|....|....:.|||....|.....|.|.:|              .:.:.
 Worm   707 SVKNDKNDELLMHIEGLYVCDVPILENEQLTVRYMDGTKDLCFEDS--------------MVYEF 757

  Fly  1139 AHDLNLLQDVD--PMEILSYLDPQPDLNTPPSSGSSNNNASDDL 1180
            |......|.:|  |..:::     |. :|..||||:.....||:
 Worm   758 AESPKHQQQIDGPPQTLMA-----PG-STASSSGSTFTPPFDDI 795

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tnaNP_001368945.1 Med15 216..>604 CDD:312941 66/275 (24%)
SP-RING_ZMIZ 792..839 CDD:319705 20/48 (42%)
miz-1NP_001255512.1 Zmiz1_N 10..102 CDD:375500
Med15 <122..>330 CDD:312941 62/274 (23%)
RING_Ubox 489..533 CDD:388418 19/47 (40%)
SP-RING finger 492..532 CDD:319361 17/43 (40%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160159367
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0002880
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3884
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.960

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