DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11811 and Patj

DIOPT Version :9

Sequence 1:NP_648408.1 Gene:CG11811 / 39213 FlyBaseID:FBgn0036099 Length:233 Species:Drosophila melanogaster
Sequence 2:XP_038965114.1 Gene:Patj / 140581 RGDID:1565362 Length:1858 Species:Rattus norvegicus


Alignment Length:270 Identity:58/270 - (21%)
Similarity:96/270 - (35%) Gaps:104/270 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 SSSSSSAAASLTSKK---------MTAPGP--------RPLVLCGPSGSGKSTLLKRLFAEFPST 62
            ||..::||..|..::         .:..||        .|.|..|.|..|..|::|||       
  Rat  1044 SSRHANAACELPEREEGEGEETPNFSHWGPPRIVEIFREPNVSLGISIVGGQTVIKRL------- 1101

  Fly    63 FGFSISHTTRKPREGEE-HGVHYYFVER-------PEMEAAIAGDEFIETAEFTGNLYGTSKA-A 118
                        :.||| .|:   |:::       .:.:|...||:.:|.:..  :|...|.| |
  Rat  1102 ------------KNGEELKGI---FIKQVLEDSPAGKTKALKTGDKILEVSGV--DLQNASHAEA 1149

  Fly   119 VREIQAQGRVCILDIEQKGVEQIKRTDLNPILI--FNN----PPSIKE---LERRLRKRG----- 169
            |..|::.|...:.     .|:.:..|   |.:|  .||    ||..::   .|::.::.|     
  Rat  1150 VEAIKSAGNPVVF-----VVQSLSST---PRVIPSVNNKGKTPPQNQDQNTQEKKAKRHGTAPPP 1206

  Fly   170 -----------SETEES-LSKRLNAAQVELDYGLTPGNFHKIINNVDIDVAYEEFRNFVVQELKE 222
                       ::|||| ....|...::...|...||..|.|                   || |
  Rat  1207 MKLPPPYRAPSADTEESEEDSALTDKKIRQRYADLPGELHII-------------------EL-E 1251

  Fly   223 QQKQGVSVNL 232
            :.|.|:.::|
  Rat  1252 KDKNGLGLSL 1261

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11811NP_648408.1 Guanylate_kin 34..219 CDD:279019 47/227 (21%)
guanyl_kin 36..216 CDD:213788 45/214 (21%)
PatjXP_038965114.1 L27_2 8..65 CDD:312549
PDZ_signaling 135..218 CDD:238492
PDZ_signaling 248..325 CDD:238492
PDZ_signaling 366..450 CDD:238492
CtpA <391..>511 CDD:223864
PDZ_signaling 572..636 CDD:238492
PDZ 684..773 CDD:214570
PDZ_signaling 1074..1165 CDD:238492 25/119 (21%)
PDZ 1244..1329 CDD:214570 8/38 (21%)
PDZ 1471..1578 CDD:214570
PDZ_signaling 1590..1670 CDD:238492
PDZ_signaling 1731..1816 CDD:238492
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0194
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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