Protein Alignment Rbfox1 and rbfox3b

DIOPT Version :9

• Sequence 1: NP_001246707.1
• Gene: Rbfox1 / 39198
• FlyBaseID: FBgn0052062
• Length: 962
• Species: Drosophila melanogaster
• Sequence 2: XP_021328437.1
• Gene: rbfox3b / 559412
• ZFINID: ZDB-GENE-091204-46
• Length: 359
• Species: Danio rerio
• Alignment Length: 289
• Identity: 119/289 - (41%)
• Similarity: 147/289 - (50%)
• Gaps: 44/289 - (15%)

  Fly   314 EGSMSGDTSPVASGEPLLQTPPAH----QQQQQQQQPLLCSSPT-SMQSSGTSVTGSSIASGTLA 373
            :.||......:.||..:|..|.|.    :..|:...|....:.| :.|.:..|..|.......|.
Zfish     3 KSSMLNSACVLLSGSGMLPAPSAFLYLAEGNQEGSNPADAMAQTYTTQYAHPSQNGIPAEFTALP 67

  Fly   374 ATSSSGVGLLPTTGLDSIANGGAPTGCAVVPASTSQVIAHLNAAAAAASGIVSPSANVATSLSSA 438
            :...:|...:|..||           ....||.|...:.:.::...|    :|..:|.|
Zfish    68 SQDYTGQSRVPDHGL-----------TLYTPAQTHSDLNNTDSQTTA----ISTGSNTA------ 111

  Fly   439 LVPAQSVAA--VAAASLDAKSQPKRLHVSNIPFRFRDPDLRAMFGQFGTILDVEIIFNERGSKGF 501
              |.:.|..  |..:....|.||||||||||||||||||||.||||||.||||||||||||||||
Zfish   112 --PTEDVTQTDVLISESTEKQQPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERGSKGF 174

  Fly   502 GFVTFANSNDAERARERLHGTVVEGRKIEVNNATARVQTKKVTAVP-------NVVLTKDGAIPA 559
            |||||..|.||:||||:|:||:|||||||||||||||.|.|....|       |.|:   ||:.|
Zfish   175 GFVTFETSADADRAREKLNGTIVEGRKIEVNNATARVMTNKKVVNPYTNSWKLNPVV---GAVYA 236

  Fly   560 PALVCV---QWPEAAVAAAMRGVAIQ-RG 584
            |.|..|   .:|.|....|.||..:: ||
Zfish   237 PELYAVTGFPYPAAGATVAYRGAHLRGRG 265

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rbfox1	NP_001246707.1	RRM	<454..>542	CDD:223796	74/87 (85%)
		RRM_FOX1_like	460..535	CDD:240853	65/74 (88%)
rbfox3b	XP_021328437.1	RRM	<15..204	CDD:330708	90/211 (43%)
		RRM_FOX1_like	133..208	CDD:240853	65/74 (88%)
		Fox-1_C	242..330	CDD:315148	8/24 (33%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C170573884
Domainoid	1	1.000	125	1.000	Domainoid score	I5404
eggNOG	1	0.900	-	-		E1_KOG0125
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	1	1.000	-	-		FOG0001186
OrthoInspector	1	1.000	-	-		otm24241
orthoMCL	1	0.900	-	-		OOG6_106936
Panther	1	1.100	-	-	O	PTHR15597
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	1	0.960	-	-
ZFIN	0	0.000	Not matched by this tool.
	10	9.700