Sequence 1: | NP_001246707.1 | Gene: | Rbfox1 / 39198 | FlyBaseID: | FBgn0052062 | Length: | 962 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_038941605.1 | Gene: | Rbfox3 / 287847 | RGDID: | 1560070 | Length: | 421 | Species: | Rattus norvegicus |
Alignment Length: | 846 | Identity: | 186/846 - (21%) |
---|---|---|---|
Similarity: | 231/846 - (27%) | Gaps: | 459/846 - (54%) |
- Green bases have known domain annotations that are detailed below.
Fly 146 SSGGC---GGGGASTANSVVVATSVSDVVNASLYMQQKTNLSTQTQTQYEYEYEYNGTSLAEPRV 207
Fly 208 PGPIPHPLTNGHAVDQVQQP--PVQQQHLQSSLPPQNVLSISTVLIANEAAESQQSSAMQNAGGG 270
Fly 271 GNTGGGGGGGGGGTPSSPLSNSPSSATASQAGGCGLTLNGSATEGSMSGDTSPVASGEPLLQTPP 335
Fly 336 AHQQQQQQQQPLLCSSPTSMQSSGTSVTGSSIASGTLAATSSSGVGLLPTTGLDSIANGGAPTGC 400
Fly 401 AVVPASTSQVIAHLNAAAAAASGIVSPSANVATSLSSALVPAQSVAAVAAASLDAKSQPKRLHVS 465
Fly 466 NIPFRFRDPDLRAMFGQFGTILDVEIIFNERGSKGFGFVTFANSNDAERARERLHGTVVEGRKIE 530
Fly 531 VNNATARVQTKKVTAVPNVVLTKDGAIPAPALVCVQWPEAAVAAAMRGVAIQRGHVGVVGATPYH 595
Fly 596 HPHHPHHHPALLAASAAAAQQQQQRQLAAAAVATAAVAQQQQQQQQAVVQQQQQQVAAAAQQQHQ 660
Fly 661 QQQQQQQQAVQQQQAVQQQQQHQQQQQQQQQQQHAAVAAAAAAASHPHMHAAHAHAHAHALGPQL 725
Fly 726 AQLQAVAVPTAASNAAALQQSLAAAIQNPSGNPNAAAAAAAYAARLSAATGATQSPQTAAAAAAA 790
Fly 791 ASMAASANAANNAAALHGFAPVYYDPFLAAAASADPNLRFQAAKPVTEVPAAQPAAILNRRTVTT 855
Fly 856 LNSNPHTINRIPVPQNVLATAPLLKTPLSQAQQQAYATAAT---TYTAVAARAAY---------- 907
Fly 908 -GAAAAAAAQPALAGYATVAGYAREY------ADPYLGHGIGPVPGYG----ATMYRGGFNRFTP 961
Fly 962 Y 962 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Rbfox1 | NP_001246707.1 | RRM | <454..>542 | CDD:223796 | 74/87 (85%) |
RRM_FOX1_like | 460..535 | CDD:240853 | 65/74 (88%) | ||
Rbfox3 | XP_038941605.1 | ELAV_HUD_SF | <71..216 | CDD:273741 | 89/306 (29%) |
RRM_FOX1_like | 145..220 | CDD:409841 | 65/74 (88%) | ||
Fox-1_C | 254..392 | CDD:403573 | 42/169 (25%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C166334675 | |
Domainoid | 1 | 1.000 | 127 | 1.000 | Domainoid score | I5240 |
eggNOG | 1 | 0.900 | - | - | E1_KOG0125 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 1 | 1.000 | - | - | FOG0001186 | |
OrthoInspector | 1 | 1.000 | - | - | otm44711 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_106936 | |
Panther | 1 | 1.100 | - | - | LDO | PTHR15597 |
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 1 | 0.960 | - | - | ||
10 | 9.700 |