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Protein Alignment Rbfox1 and spn-4
DIOPT Version :9
Sequence 1: | NP_001246707.1 |
Gene: | Rbfox1 / 39198 |
FlyBaseID: | FBgn0052062 |
Length: | 962 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_504717.1 |
Gene: | spn-4 / 179070 |
WormBaseID: | WBGene00004984 |
Length: | 351 |
Species: | Caenorhabditis elegans |
Alignment Length: | 151 |
Identity: | 61/151 - (40%) |
Similarity: | 79/151 - (52%) |
Gaps: | 11/151 - (7%) |
- Green bases have known domain annotations that are detailed below.
Fly 415 NAAAAAASGIVSPSANVATSLSSALVPAQSVAAVAAASLDAKSQPKRLHVSNIPFRFRDPDLRAM 479
|.|..|..|:...|||.:.......:| ::........|.....|::||||||.||:.||.||
Worm 9 NFAHRAHDGLPFNSANPSNKDPIFTMP---ISVKPKTREPASFTDNRIYVSNIPFSFREQDLAAM 70
Fly 480 FGQFGTILDVEIIFNERGSKGFGFVTFANSNDAERARERLHGTVVEGRKIEVNNATARVQTKKVT 544
|..:|.:|.|||:.|:||||||||||..:....|:||..||.:.|:||.|||..||. .:.|.:.
Worm 71 FFAYGRVLSVEIVTNDRGSKGFGFVTLDSIESCEKARAALHESHVQGRIIEVRRATP-TRRKLIN 134
Fly 545 AVPNVVLTKDGAIPAPALVCV 565
...|.|| |.|.| ||
Worm 135 NPQNEVL------PPPKL-CV 148
|
Known Domains:
Indicated by green bases in alignment.
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
1 |
0.900 |
- |
- |
|
E1_KOG0125 |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
Isobase |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
1 |
1.100 |
- |
- |
O |
PTHR15597 |
Phylome |
0 | 0.000 |
Not matched by this tool. |
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
2 | 2.000 |
|
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