Sequence 1: | NP_001246707.1 | Gene: | Rbfox1 / 39198 | FlyBaseID: | FBgn0052062 | Length: | 962 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_021336046.1 | Gene: | rbfox3a / 100538330 | ZFINID: | ZDB-GENE-111213-1 | Length: | 429 | Species: | Danio rerio |
Alignment Length: | 438 | Identity: | 145/438 - (33%) |
---|---|---|---|
Similarity: | 178/438 - (40%) | Gaps: | 144/438 - (32%) |
- Green bases have known domain annotations that are detailed below.
Fly 283 GTPSSPLSNSPSSATASQAGGCGLTLNGSATEGSMSGDTSPVASGEPLLQTPPAHQQQQQQQQPL 347
Fly 348 LCSSPT---SMQSSGTSVTGSSIASGTLAATS-------SSGVGLLPTTG-------LDSIANGG 395
Fly 396 AP-----------------------TGCAVVPASTSQVI------AHLNAAAAAASGIVSPSANV 431
Fly 432 ATSLSSA-------------LVPAQSVAAVAAASLDAKSQPKRLHVSNIPFRFRDPDLRAMFGQF 483
Fly 484 GTILDVEIIFNERGSKGFGFVTFANSNDAERARERLHGTVVEGRKIEVNNATARVQTKKVTAVP- 547
Fly 548 ------NVVLTKDGAIPAPALVCV---QWPEAAVAAAMRGVAIQ-RGHV---------------- 586
Fly 587 --------GVVGATPY-HHPHHPHHHPALLAASAAAAQQQQQRQLAAA 625 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Rbfox1 | NP_001246707.1 | RRM | <454..>542 | CDD:223796 | 74/87 (85%) |
RRM_FOX1_like | 460..535 | CDD:240853 | 65/74 (88%) | ||
rbfox3a | XP_021336046.1 | RRM_FOX1_like | 201..276 | CDD:240853 | 65/74 (88%) |
Fox-1_C | 310..400 | CDD:315148 | 21/90 (23%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C170573883 | |
Domainoid | 1 | 1.000 | 125 | 1.000 | Domainoid score | I5404 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 1 | 1.000 | - | - | FOG0001186 | |
OrthoInspector | 1 | 1.000 | - | - | otm24241 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_106936 | |
Panther | 1 | 1.100 | - | - | LDO | PTHR15597 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
7 | 6.840 |