Protein Alignment Gem3 and SUB2

DIOPT Version :10

• Sequence 1: NP_524019.1
• Gene: Gem3 / 39195
• FlyBaseID: FBgn0011802
• Length: 1028
• Species: Drosophila melanogaster
• Sequence 2: NP_010199.1
• Gene: SUB2 / 851475
• SGDID: S000002242
• Length: 446
• Species: Saccharomyces cerevisiae
• Alignment Length: 404
• Identity: 123/404 - (30%)
• Similarity: 220/404 - (54%)
• Gaps: 18/404 - (4%)

  Fly     7 HSLAGGEERSSDVAPGQVKT-FEELRLYRNLLNGLKRNNFVTPTKIQAAAIPMALAKMDLIIQSK 70
            ::.|.|:::.|.|  |...| |::..|...|...:....|..|:::|...||.::...|::.|:|
Yeast    45 NNTAAGDKKGSYV--GIHSTGFKDFLLKPELSRAIIDCGFEHPSEVQQHTIPQSIHGTDVLCQAK 107

  Fly    71 SGTGKTLIYVIAVVQSFNPNINQPHAMIVVPTRELAIQVQDTFFHLCKSFRDFKCSAFIGGTDVA 135
            ||.|||.::|::.:|..:|...:...:::...||||.|:::.:....|...|.|.:.|.|||.::
Yeast   108 SGLGKTAVFVLSTLQQLDPVPGEVAVVVICNARELAYQIRNEYLRFSKYMPDVKTAVFYGGTPIS 172

  Fly   136 KDRKRMNES----RVIIGTPGRLLHLYENRVFDVSKLRLLVLDEADQLYQTKSLQHTVSKLIEAM 196
            ||.:.:...    .:::.|||||..|...:..|:|.::..|:||.|::.:...::..|.::..|.
Yeast   173 KDAELLKNKDTAPHIVVATPGRLKALVREKYIDLSHVKNFVIDECDKVLEELDMRRDVQEIFRAT 237

  Fly   197 PKNRQIIACSATYDQNLDERLAKVMDKPMLISNSERATVLL-GIRQFVYELPQQNNSVEEMRLKL 260
            |:::|::..|||..|.:.....:.:..|:.|...:.|.:.| |::|:..:|        |.|.|.
Yeast   238 PRDKQVMMFSATLSQEIRPICRRFLQNPLEIFVDDEAKLTLHGLQQYYIKL--------EEREKN 294

  Fly   261 QILGQIFNQLPYEQAIIFASSQMRADSYKNYLTASGIDCHLISGAMEQSERLHVFEGYRNFTMRI 325
            :.|.|:.:.|.:.|.|||..|..||:.....|.||......:.|.|:|.||:..::.:::|..||
Yeast   295 RKLAQLLDDLEFNQVIIFVKSTTRANELTKLLNASNFPAITVHGHMKQEERIARYKAFKDFEKRI 359

  Fly   326 LVATDLMARGVDSPHANLVINIDPPQDHVTYLHRIGRAGRFGSKGIAITFIASKKESQRFREMSK 390
            .|:||:..||:|....||.||.|...:...||||:|||||||:||:||:|::||::.:...::.:
Yeast   360 CVSTDVFGRGIDIERINLAINYDLTNEADQYLHRVGRAGRFGTKGLAISFVSSKEDEEVLAKIQE 424

  Fly   391 KIATAWSVLEFPKE 404
            :...  .:.|||:|
Yeast   425 RFDV--KIAEFPEE 436

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Gem3	NP_524019.1	SrmB	26..409	CDD:440279	118/385 (31%)
SUB2	NP_010199.1	DEADc_DDX39	61..270	CDD:350708	56/208 (27%)
		SF2_C_DEAD	281..410	CDD:350174	52/136 (38%)