Protein Alignment Gem3 and Dbp73D

DIOPT Version :9

• Sequence 1: NP_001261678.1
• Gene: Gem3 / 39195
• FlyBaseID: FBgn0011802
• Length: 1028
• Species: Drosophila melanogaster
• Sequence 2: NP_476833.1
• Gene: Dbp73D / 39871
• FlyBaseID: FBgn0004556
• Length: 687
• Species: Drosophila melanogaster
• Alignment Length: 622
• Identity: 144/622 - (23%)
• Similarity: 258/622 - (41%)
• Gaps: 135/622 - (21%)

  Fly     5 IAHS--LAGGEERSSDVAPGQ--VKTFEELRLYR-NLLNGLKRNNF------VTPTKIQAAAIPM 58
            :||.  :.||..:..:..|..  :...:.|..|. ..|..:|....      |.|..::|.|.|.
  Fly   115 LAHPTIIEGGSLQPEEEVPASEAIDQLDYLEKYTCQALKQMKIKRLFPVQKQVIPWILEAHAKPP 179

  Fly    59 ALAKMDLIIQSKSGTGKTLIYVIAVVQSFNPNIN-QPHAMIVVPTRELAIQVQDTFFHLCKSFRD 122
            .....|:.:.:.:|:||||.:.|.:||..:..:: :..|::|:|..|||:||......||.....
  Fly   180 PFRPRDICVSAPTGSGKTLAFAIPIVQLLSQRVDCKVRALVVLPVAELALQVYRVISELCSKTEL 244

  Fly   123 FKCSAFIGGTDVAKDRKRMNESR---------------VIIGTPGRLL-HLYENRVFDVSKLRLL 171
            ..|.       ::|..|..:|..               :::.|||||: ||:..:.|.:..|:.|
  Fly   245 EVCL-------LSKQHKLEDEQEKLVEQYKGKYYSKADIVVTTPGRLVDHLHATKGFCLKSLKFL 302

  Fly   172 VLDEADQ---------LYQTKS-LQHTVSKLI-------------EAMPKNRQIIACSATYDQN- 212
            |:||||:         ||...| ::.|..:|:             .:..|....:..|||..|:
  Fly   303 VIDEADRIMDAVFQNWLYHLDSHVKETTDQLLAGTQAPLCYAELQASFGKQPHKLLFSATLSQDP 367

  Fly   213 ---LDERL------AKVMDKPMLISNSERAT---VLLGIRQFV--YELP---QQNNSVEEMRLKL 260
               .|.||      |.|:..|:|...:|...   .|....|||  |..|   .:...|.|:|||.
  Fly   368 EKLQDLRLFQPRLFATVLTMPVLKDATEEGADTEALTDPGQFVGRYTTPAELTEQYCVTELRLKP 432

  Fly   261 QILGQIFNQLPYEQAIIFASSQMRADS--------YKNYLT-ASGIDCHLISGAMEQSERLHVFE 316
            ..:..:..:..:::.:.|.:|..:|..        ::.|.| .|.:..:|  .|..::|||..|.
  Fly   433 LTVFALVEKYKWKRFLCFTNSSDQATRLTFVLKVLFQKYSTKVSELSGNL--SAKVRNERLRDFA 495

  Fly   317 GYRNFTMRILVATDLMARGVDSPHANLVINIDPPQDHVTYLHRIGRAGRFGSKGIAITFIASKKE 381
            ..:   :..|:.:|.:|||:|....::|::.:.|:...||:||:||..|.|.||.|:| :.::::
  Fly   496 AGK---INGLICSDALARGIDVADVDVVLSYETPRHITTYIHRVGRTARAGRKGTAVT-VLTEQD 556

  Fly   382 SQRFREMSKKIATAWSVLEFPKEPMPNEFNFW-DFEKYNFDYYIKEENPLQEMPMPIKENRSKEN 445
            ...|::          :|....:.:..|.:.. |.|   ..:.::.:..|..:.....:|::::.
  Fly   557 MTLFKK----------ILSDANKGLGEEIHVSPDIE---IQHAVEYKEALAGLRSEKVKNKNQKM 608

  Fly   446 VDASSVDLENL-QKDQDGKRRDPDKLPVALENVETQKELELENLPESSHNNKNLRVKEKEIVRQG 509
            .:.:.|..:.| .|.|              |...|.:.|.|         .:.|::|..|||:..
  Fly   609 AEKNRVATKALIHKKQ--------------EETATVRPLTL---------MEKLQIKANEIVQSS 650

  Fly   510 KLKETNSKAGGSKTNKTERRKKSNTPSKLQKQITEVQ 546
            |      |:..:|.:||:..|....|.:.:|||...|
  Fly   651 K------KSSETKNSKTKADKTKYQPKETKKQIIAKQ 681

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Gem3	NP_001261678.1	SrmB	24..541	CDD:223587	135/592 (23%)
		P-loop_NTPase	27..228	CDD:304359	64/257 (25%)
		Helicase_C	259..367	CDD:278689	28/116 (24%)
Dbp73D	NP_476833.1	PRK11192	149..629	CDD:236877	118/519 (23%)
		DEAD	162..370	CDD:278688	53/214 (25%)
		HELICc	418..551	CDD:238034	37/138 (27%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C45451721
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	1	0.930