DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gem3 and CG10333

DIOPT Version :10

Sequence 1:NP_524019.1 Gene:Gem3 / 39195 FlyBaseID:FBgn0011802 Length:1028 Species:Drosophila melanogaster
Sequence 2:NP_609888.2 Gene:CG10333 / 35112 FlyBaseID:FBgn0032690 Length:822 Species:Drosophila melanogaster


Alignment Length:446 Identity:127/446 - (28%)
Similarity:206/446 - (46%) Gaps:77/446 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 SLAGGEERSSDVAPGQVKTFEELRLYRNLLNGLKRNNFVTPTKIQAAAIPMALAKMDLIIQSKSG 72
            ::.||.      .|..::::.|....:.:::.:.:..:..||.||..|||:.|...|:|..:::|
  Fly   383 TIKGGR------IPNPIRSWNESGFPKEIIDIIDKVGYKEPTPIQRQAIPIGLQNRDIIGVAETG 441

  Fly    73 TGKTLIYVIAV---VQSFNPNINQ-------PHAMIVVPTRELAIQVQD--TFFHLCKSFRDFKC 125
            :||||.::|.:   :||. |.|.:       |:|:|:.||||||.|:::  |.|......|..  
  Fly   442 SGKTLAFLIPLLSWIQSL-PKIERLEDVDQGPYAIIMAPTRELAQQIEEETTKFGQPLGIRTV-- 503

  Fly   126 SAFIGGTDVAKDRKRMN-ESRVIIGTPGRLLHLYENRVFDVSKLRLLVLDEADQLYQTKSLQHTV 189
             ..:||....:...|:. ...::|.|||||:.:.|||...:::...:||||||::.. ...:..|
  Fly   504 -VVVGGLSREEQGFRLRLGCEIVIATPGRLIDVLENRYLVLNQCTYIVLDEADRMID-MGFEPDV 566

  Fly   190 SKLIEAMP-------------------------KNRQIIACSATYDQNLDERLAKV-MDKPMLIS 228
            .|::|.||                         |.||.:..:||....: ||||:. :.:|    
  Fly   567 QKILEYMPVTNLKPDTEEAEDETKLMENFYTKKKYRQTVMFTATMPPAV-ERLARTYLRRP---- 626

  Fly   229 NSERATVLLG--------IRQFVYELPQQNNSVEEMRLKLQILGQIFNQLPYEQAIIFASSQMRA 285
                |||.:|        ..|.||.:.:     .:.|.||.   :|.::......|||.:.:..|
  Fly   627 ----ATVYIGSVGKPTERTEQIVYMMGE-----NDKRKKLM---EILSRKIDPPVIIFVNQKKGA 679

  Fly   286 DSYKNYLTASGIDCHLISGAMEQSERLHVFEGYRNFTMRILVATDLMARGVDSPHANLVINIDPP 350
            |.....|...|.:...:.|...|.:|.:.....::....||||||:..||:|....:||||.|..
  Fly   680 DVLAKGLEKLGYNSCTLHGGKGQEQREYALAALKSGAKDILVATDVAGRGIDIKDVSLVINYDMA 744

  Fly   351 QDHVTYLHRIGRAGRFGSKGIAITFIASKKESQRFREMSKKIATAWSVLEFPKEPM 406
            :....|.|||||.||.|..|.||:|: :|.:|..|.:: |:..:|..|...|.|.|
  Fly   745 KTIEDYTHRIGRTGRAGKTGCAISFV-TKDDSALFYDL-KQCVSASPVSTCPPELM 798

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gem3NP_524019.1 SrmB 26..409 CDD:440279 124/428 (29%)
CG10333NP_609888.2 DUF5401 <66..354 CDD:375164
SrmB 395..783 CDD:440279 118/411 (29%)
Blue background indicates that the domain is not in the aligned region.

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