Protein Alignment Gem3 and ddx19b

DIOPT Version :10

• Sequence 1: NP_524019.1
• Gene: Gem3 / 39195
• FlyBaseID: FBgn0011802
• Length: 1028
• Species: Drosophila melanogaster
• Sequence 2: NP_775365.1
• Gene: ddx19b / 192339
• ZFINID: ZDB-GENE-020419-30
• Length: 487
• Species: Danio rerio
• Alignment Length: 387
• Identity: 129/387 - (33%)
• Similarity: 201/387 - (51%)
• Gaps: 25/387 - (6%)

  Fly    24 VKTFEELRLYRNLLNGLKRNNFVTPTKIQAAAIPMALAK--MDLIIQSKSGTGKTLIYVIAVVQS 86
            ||:||||||...||.|:....|..|:|||..|:||.||:  .:||.||:|.||||..:|:|::..
Zfish    99 VKSFEELRLKPQLLQGVYAMGFNRPSKIQETALPMMLAEPPQNLIAQSQSRTGKTAAFVLAMLSH 163

  Fly    87 FNPNINQPHAMIVVPTRELAIQVQDTFFHLCKSFRDFKCSAFIGGTDVAKDRKRMNESRVIIGTP 151
            .:.....|..:.|.||.|||:|.......:.|.:.:.:....|.|..:.:..|.  :.:::||||
Zfish   164 VDTENKWPECLCVCPTYELALQTGKVIEQMGKHYPEVQLVYAIRGNKLERGAKL--QEQIVIGTP 226

  Fly   152 GRLLHLYENRVF-DVSKLRLLVLDEADQLYQTKSLQHTVSKLIEAMPKNRQIIACSATYDQNLDE 215
            |.:|...:...| |..|:::.||||||.:..|:..|....::...:||..|::..|||:::.:..
Zfish   227 GTVLDWCQKLKFIDPKKIKVFVLDEADVMIATQGHQDQSVRIQRMLPKTCQMLLFSATFEETVWN 291

  Fly   216 RLAKVMDKPMLISNSERATVLLGIRQFVYELPQQNNSVEEMRLKLQILGQIFNQLPYEQAIIFAS 280
            ...:::..|.:|........|..|:|: |.:   .||.||   |.|.|..|:..:...||:||..
Zfish   292 FAKRIVPDPNIIKLKREEETLDTIKQY-YVI---CNSKEE---KFQALCNIYGAITIAQAMIFCH 349

  Fly   281 SQMRADSYKNYLTASGIDCHLISGAMEQSERLHVFEGYRNFTMRILVATDLMARGVDSPHANLVI 345
            ::..|......|:..|....|:||.|:..:|..|.|.:|:...::||.|::.|||:|....::||
Zfish   350 TRKTAGWLAGELSREGHQVALLSGEMQVEQRAAVIERFRDGKEKVLVTTNVCARGIDVEQVSVVI 414

  Fly   346 NIDPP------QDHVTYLHRIGRAGRFGSKGIAITFIASK-------KESQRFREMSKKIAT 394
            |.|.|      .|:.||||||||.||||.:|:||....||       :....|.:..:|:.|
Zfish   415 NFDLPVDKDGNPDNETYLHRIGRTGRFGKRGLAINMADSKFSMNTLNRIQDHFNKKIEKLDT 476

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Gem3	NP_524019.1	SrmB	26..409	CDD:440279	127/385 (33%)
ddx19b	NP_775365.1	DEAD-like_helicase_N	83..311	CDD:475120	69/213 (32%)
		SF2_C_DEAD	315..450	CDD:350174	54/141 (38%)