DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG12362 and ARI8

DIOPT Version :9

Sequence 1:NP_648392.1 Gene:CG12362 / 39193 FlyBaseID:FBgn0036082 Length:511 Species:Drosophila melanogaster
Sequence 2:NP_176722.2 Gene:ARI8 / 842854 AraportID:AT1G65430 Length:567 Species:Arabidopsis thaliana


Alignment Length:489 Identity:142/489 - (29%)
Similarity:232/489 - (47%) Gaps:65/489 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 SEMEFSDEDHGDSHRSLLTHMSCENDSDSEDTCTEILLPENSNSPETEDFVYKVLSVDQIVQHQR 67
            |:...||||..|.....:        .|:.|...:::......:       |.|||...|.:.|.
plant    15 SDYADSDEDDADGEYEFV--------DDAADDSDDLIFRRRQQN-------YSVLSEADICKLQE 64

  Fly    68 NIIDEVNNVLNLPPQVTRIILNHFKWDKESLFENYFESNPK-----DFFQRAHVLNPFEKKIERE 127
            :.|..::.||::....:.|:|.|:.|....:.:.:|....|     ...::..|..|.:.:::  
plant    65 DDISRISTVLSISRNSSAILLRHYNWCVSRVHDEWFADEEKVRDAVGLLEKPVVDFPTDGELD-- 127

  Fly   128 SAASTSCAIPQLCGICFCS--CDELIGLGCGHNFCAACWKQYLANKTCSEGLANTIKCPAANCEI 190
                        |||||.:  .|:|....|||.||.:||:.|:...........|::||..:|..
plant   128 ------------CGICFETFLSDKLHAAACGHPFCDSCWEGYITTAINDGPGCLTLRCPDPSCRA 180

  Fly   191 LVDYISFLKLADDSEVVERYQQLITNTFVECNMLMRWCPAPNCSHAVKAVCAEPR-AVLCKCGHE 254
            .|.......||.|.: .::|......::||.|...:|||||.|.:||..|..... .|.|:|.:.
plant   181 AVGQDMINLLAPDKD-KQKYTSYFVRSYVEDNRKTKWCPAPGCDYAVNFVVGSGNYDVNCRCCYS 244

  Fly   255 FCFACGENWHEPASCSSLKKWVKKCLEDSETSNWIAQNTKECPKCNVTIEKDGGCNHMVCKNPSC 319
            ||:.|.|..|.|..|.::.|||.|...:||..|||..|:|.||||...|||:.||.|:.| .|.|
plant   245 FCWNCAEEAHRPVDCDTVSKWVLKNSAESENMNWILANSKPCPKCKRPIEKNQGCMHITC-TPPC 308

  Fly   320 RYDFCWVCLGSWEPHG---SSWYSCNRFD--------EEEAKQARLAQQKYRSSMARYLHYYNRY 373
            :::|||:|||:|..||   ..:|:|||::        :|..|:..:|    ::|:.||.|||.|:
plant   309 KFEFCWLCLGAWTEHGEKTGGFYACNRYEAAKQDGIYDETEKRREMA----KNSLERYTHYYERW 369

  Fly   374 SNHMQSLKMENKLYSNIQAKMDDMQEEMSWIEVQ------FLRDAVDVLCQCRTTLMYSYVFAFY 432
            :.:..|   ..|...:::....|..|::|.|:.|      |:.:|...:.:||..|.::|.:.||
plant   370 ATNQSS---RQKALLDLKKMQTDDIEKLSDIQCQPESQLKFIIEAWLQIVECRRVLKWTYAYGFY 431

  Fly   433 L--MNNNQKIIFEDNQKDMEMATEKLSECLEREI 464
            :  ..:.:::.||..|.:.|...|:|.:|.|:|:
plant   432 IPDQEHGKRVFFEYLQGEAESGLERLHQCAEKEL 465

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12362NP_648392.1 IBR 208..269 CDD:214763 22/61 (36%)
IBR 273..331 CDD:279784 30/57 (53%)
ARI8NP_176722.2 RING-HC_RBR_TRIAD1_like 128..178 CDD:319537 18/49 (37%)
RING-HC finger (C3HC4-type) 128..178 CDD:319537 18/49 (37%)
IBR 197..259 CDD:214763 22/61 (36%)
IBR <281..320 CDD:366672 21/39 (54%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 76 1.000 Domainoid score I3141
eggNOG 1 0.900 - - E1_KOG1815
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 252 1.000 Inparanoid score I1022
OMA 1 1.010 - - QHG54219
OrthoDB 1 1.010 - - D469819at2759
OrthoFinder 1 1.000 - - FOG0000379
OrthoInspector 1 1.000 - - mtm1045
orthoMCL 1 0.900 - - OOG6_100963
Panther 1 1.100 - - O PTHR11685
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X1756
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1312.840

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