DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12362 and AT4G01020

DIOPT Version :10

Sequence 1:NP_648392.1 Gene:CG12362 / 39193 FlyBaseID:FBgn0036082 Length:511 Species:Drosophila melanogaster
Sequence 2:NP_567206.1 Gene:AT4G01020 / 826439 AraportID:AT4G01020 Length:1787 Species:Arabidopsis thaliana


Alignment Length:330 Identity:82/330 - (24%)
Similarity:129/330 - (39%) Gaps:67/330 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 DSHRSLLTHMSCENDSDSEDTCTEILLPENSNSPETEDFVYKVLSVDQIVQHQRNIIDEVNNVLN 78
            |.|.|....:.........|...|::   ....||.:....||..||..:..:.::| :|:....
plant  1471 DYHESKQLEIHLRGPEIRPDLMKEVV---KRFGPELQGIKEKVHGVDLKLNTRYHVI-QVHGSKE 1531

  Fly    79 LPPQVTRIILNHFKWDKESLFENYFESNPKDFFQRAHVLNPFEKKIERESAASTSCAIPQLCGIC 143
            :..:|.::: |....:|.:|.|                 .|.|.::|              |.||
plant  1532 MRQEVQKMV-NELAREKSALGE-----------------KPDEIELE--------------CPIC 1564

  Fly   144 FCSCDELIGL-GCGHNFCAAC-WKQYLANKTCSEGLANTIKCPAANCE---ILVDYISFLKLADD 203
            ....|:...| ||.|.||.|| .:|:.|:....:  |..|.|...:|.   ::.|..:.|.    
plant  1565 LSEVDDGYSLEGCSHLFCKACLLEQFEASMRNFD--AFPILCSHIDCGAPIVVADMRALLS---- 1623

  Fly   204 SEVVERYQQLIT---NTFV-ECNMLMRWCPAPNCSHAVKAV----CAEPRAVLC-KCGHEFCFAC 259
               .|:..:||:   :.|| ..:..:|:|..|:|....:..    ..||  .:| .|..|.|..|
plant  1624 ---QEKLDELISASLSAFVTSSDGKLRFCSTPDCPSIYRVAGPQESGEP--FICGACHSETCTRC 1683

  Fly   260 GENWHEPASCSSLKKWVKKCLEDSETSNWI-AQNTKECPKCNVTIEKDGGCNHMVCKNPSCRYDF 323
            ...:|...:|...||:.:.  .|....:|. .::.||||.|..||||..||||:.|:   |....
plant  1684 HLEYHPLITCERYKKFKEN--PDLSLKDWAKGKDVKECPICKSTIEKTDGCNHLQCR---CGKHI 1743

  Fly   324 CWVCL 328
            ||.||
plant  1744 CWTCL 1748

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12362NP_648392.1 RING-HC_RBR_HHARI 138..194 CDD:438288 18/60 (30%)
BRcat_RBR_HHARI-like 203..284 CDD:439004 21/89 (24%)
Rcat_RBR_HHARI-like 288..345 CDD:439017 20/42 (48%)
Ariadne 346..>480 CDD:466073
AT4G01020NP_567206.1 HrpA 301..>753 CDD:441249
OB_NTP_bind 857..934 CDD:400182
RING_Ubox 1555..>1591 CDD:473075 15/49 (31%)
BRcat_RBR 1643..1696 CDD:438996 13/54 (24%)
Rcat_RBR_DEAH12-like 1715..1765 CDD:439036 19/37 (51%)
Blue background indicates that the domain is not in the aligned region.

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