back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment CG12362 and sharpin

DIOPT Version :9

Sequence 1:	NP_648392.1	Gene:	CG12362 / 39193	FlyBaseID:	FBgn0036082	Length:	511	Species:	Drosophila melanogaster
Sequence 2:	XP_001333481.5	Gene:	sharpin / 793673	ZFINID:	ZDB-GENE-101223-1	Length:	394	Species:	Danio rerio

Alignment Length:	157	Identity:	28/157 - (17%)
Similarity:	58/157 - (36%)	Gaps:	21/157 - (13%)

- Green bases have known domain annotations that are detailed below.

  Fly   330 SWEPHGSSWYSCN-RFDEEEAKQARLAQQKYRSSMARYLHYYNRYSNHMQSLKMENKLYSNIQAK 393
            |..|:.:..::.. |..:...:...||:...||..      |...|.....|::....:..:...
Zfish    33 SMNPNRAGLFTLTLRHTDRGGRSVSLAEFDLRSVQ------YELKSPRCHELRLLKPPHDCLSFS 91

  Fly   394 MDDMQEEMSW--IEVQFLRDAVDVLCQCRTTLMYSYVFAFYLMNNNQKIIFEDNQKDMEMATEKL 456
            ....||...|  :.:..||::..|...|:..|.       |:.:..:..:...:.|: |:..| |
Zfish    92 FRSEQEAQEWATVVMSSLRESHRVASICQEGLQ-------YVKSGEKSAVLSLSMKE-ELCVE-L 147

  Fly   457 SECLE---REITVKNIYEVKQKVLDLS 480
            |..:|   .:...:...::.|:.:.||
Zfish   148 SRAIEAGDAQAAARYATDLAQQQMTLS 174

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.