DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12362 and Cul9

DIOPT Version :10

Sequence 1:NP_648392.1 Gene:CG12362 / 39193 FlyBaseID:FBgn0036082 Length:511 Species:Drosophila melanogaster
Sequence 2:XP_011245024.1 Gene:Cul9 / 78309 MGIID:1925559 Length:2580 Species:Mus musculus


Alignment Length:500 Identity:116/500 - (23%)
Similarity:196/500 - (39%) Gaps:84/500 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 SLLTHMSCENDSDSEDTCTEILL---PE---------------NSNS----PETEDFVY------ 54
            |.:.|:..:...:..|...::|:   ||               |.|:    |..|..|.      
Mouse  1973 SCILHLLGQGYVERRDDRPQVLMYATPEPMGPCRGQADVPFCGNKNTETSRPSPEAVVALASLQL 2037

  Fly    55 ---KVLSVDQIVQHQRNIIDEVNNVLNLPPQVTRIILNHFKWDKESLFENYFESNPKDFFQRAHV 116
               :.:|..::.......:.:|...|||.|.|.:.:|.|..|..|.|.::| ..:|:.....|.:
Mouse  2038 PAGRTMSPQEVEGLMEQTVRQVQETLNLEPDVAQHLLAHSHWGTEQLLQSY-SDDPEPLLLAAGL 2101

  Fly   117 LNPFEKKIERESAASTSCAIPQLCGICFCSC---DELIGLGCGHNFCAACWKQYLANKTCSEGLA 178
            ..|..:.:...         |..|.:|....   |:...|.|.|..|.:||.:||..: ..:...
Mouse  2102 RVPQAQVVPTR---------PDQCPVCVTPLGPHDDSPSLCCLHCCCKSCWNEYLTTR-IEQNFV 2156

  Fly   179 NTIKCPAANCEILVDYISFLKLADDSEVVERYQQLITNTFVECNMLMRWCPAP-NCSHAVKAVCA 242
            ....||.|:|...........:....||:.:|::.:...:||....:.||..| .|..       
Mouse  2157 LNCTCPIADCPAQPTGAFIRNIVSSPEVISKYEKALLRGYVESCSNLTWCTNPQGCDR------- 2214

  Fly   243 EPRAVLC-----------KCGHEFCFACG-ENWHEPASCSSLKKWVKK------CLEDSETSNWI 289
                :||           |||...||:|. ...|.||||..:.:||..      ...::::.:..
Mouse  2215 ----ILCRQGLGSGTTCSKCGWASCFSCSFPEAHYPASCGHMSQWVDDGGYYDGMSVEAQSKHLA 2275

  Fly   290 AQNTKECPKCNVTIEKDGGCNHMVCKNPSCRYDFCWVCLGSWEPHGSSWYSCNRFDEEEAKQARL 354
            ...:|.||.|...|||:.||.||.|..  |.:.|||.||.||:|....:|:|:..::.......:
Mouse  2276 KLISKRCPSCQAPIEKNEGCLHMTCAR--CNHGFCWRCLKSWKPSHKDYYNCSAMEDCMKVLGEV 2338

  Fly   355 AQQKYRSSMARYLHYYNRYSNHMQSLKMENKLYSNIQAKMDDMQEEMSWIEVQFLRDAVDVLCQC 419
            .:...||...:.:|      :|: |:.:..:...|::.:...:||........||:||...|.|.
Mouse  2339 ERGLLRSPAYQNVH------SHL-SMCLHQEFAVNLRNQASAIQEVPPPKSFTFLQDACRALEQA 2396

  Fly   420 RTTLMYSYVFAFYLMNNNQKIIFEDNQKDMEMATEKLSECLEREI 464
            |..|.|:.|::||..:.....:.|...:::|:.|..|...||..:
Mouse  2397 RKVLAYACVYSFYSQDTEYMDVVEQQTENLELHTNALQILLEETL 2441

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12362NP_648392.1 RING-HC_RBR_HHARI 138..194 CDD:438288 15/58 (26%)
BRcat_RBR_HHARI-like 203..284 CDD:439004 24/99 (24%)
Rcat_RBR_HHARI-like 288..345 CDD:439017 23/56 (41%)
Ariadne 346..>480 CDD:466073 26/118 (22%)
Cul9XP_011245024.1 Cul7 382..456 CDD:463286
APC10-like 1184..1314 CDD:382862
COG5647 <1736..1989 CDD:227934 2/15 (13%)
Cullin <1740..1857 CDD:459983
RING_Ubox 2114..2166 CDD:473075 14/52 (27%)
BRcat_RBR_CUL9 2192..2265 CDD:439008 21/83 (25%)
Rcat_RBR_CUL9 2273..2328 CDD:439020 23/56 (41%)
Blue background indicates that the domain is not in the aligned region.

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