DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12362 and rnf216

DIOPT Version :10

Sequence 1:NP_648392.1 Gene:CG12362 / 39193 FlyBaseID:FBgn0036082 Length:511 Species:Drosophila melanogaster
Sequence 2:XP_687871.3 Gene:rnf216 / 559441 ZFINID:ZDB-GENE-081104-199 Length:834 Species:Danio rerio


Alignment Length:413 Identity:82/413 - (19%)
Similarity:134/413 - (32%) Gaps:137/413 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 LLTHMSCENDSDSEDTCTEILLPEN-SNSPETED----FVYKVLSVDQIVQHQRNIIDEVNNVLN 78
            ||.:......::|..|.:.:||..| |.:.|:|:    |..|.:..:.:||....::.:..   .
Zfish   297 LLENPDYPKKANSVLTQSSVLLETNDSETQESENYFDYFKLKTVGPEVVVQAADMLMGDFR---M 358

  Fly    79 LPPQVTRIILN----HFKWDKESLFE--NYFESNPKDFF----------QRAHVLNPFEK---KI 124
            |..|..:..||    |:...:::|||  ..::.|..|..          :||::...||:   |:
Zfish   359 LSCQDIKWALNCLKGHYAITRKALFEALKKWQENSTDPSGKKKRRREPNERAYIDFKFEQGSFKL 423

  Fly   125 ER---------------ESAASTSCAIPQL----------------------------------- 139
            ||               |:....| .:.:|                                   
Zfish   424 ERKMYFLEKNRRWSRGNETTLEAS-LVKELQFYEQKAKEMAEHEDFLLALQVNEEQYQKDGQLIE 487

  Fly   140 CGICFC---SCDELIGLGCGHNFCAACWKQYLANKTCSEGLANTIKCPAANCEILVDYISFLKLA 201
            ||.| |   :.:|:.....||.||..|..:|........| .:.:.|...||..........|:.
Zfish   488 CGCC-CGEFAFEEMTQCTDGHLFCKECLVKYAQEAVFGSG-RSELSCMDGNCTCSFPNSELEKVL 550

  Fly   202 DDSEVVERYQQLITNTFVECNMLMRWCPAPNCSHAVKAVCAEP--RAVLC--------------- 249
            .::.:.:.|::                   ....||.|.||:.  |...|               
Zfish   551 PENILCKYYER-------------------QAEEAVAATCADELVRCPFCNFPALLDKDVSLFSC 596

  Fly   250 ---KCGHEFCFACGENWHEPASCSSLKKWVKKCLEDSE-------TSNWIAQNTKECPKCNVTIE 304
               :|..|.|..|...|.|.|.     |..::.||..|       .....|...::|.||...:.
Zfish   597 PNPRCRKESCRKCHVVWKEHAG-----KTCEQVLERDEIRLRVAFEEKMTAARVRKCHKCATGLV 656

  Fly   305 KDGGCNHMVCKNPSCRYDFCWVC 327
            |..|||.|.|:   |....|::|
Zfish   657 KSEGCNRMWCR---CGAYMCYLC 676

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12362NP_648392.1 RING-HC_RBR_HHARI 138..194 CDD:438288 16/93 (17%)
BRcat_RBR_HHARI-like 203..284 CDD:439004 18/100 (18%)
Rcat_RBR_HHARI-like 288..345 CDD:439017 13/40 (33%)
Ariadne 346..>480 CDD:466073
rnf216XP_687871.3 RING-HC_RBR_RNF216 486..542 CDD:438292 15/57 (26%)
BRcat_RBR_RNF216 573..624 CDD:439000 10/55 (18%)
Rcat_RBR_RNF216 637..693 CDD:439014 13/43 (30%)
Blue background indicates that the domain is not in the aligned region.

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