DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG12362 and arih2

DIOPT Version :9

Sequence 1:NP_648392.1 Gene:CG12362 / 39193 FlyBaseID:FBgn0036082 Length:511 Species:Drosophila melanogaster
Sequence 2:NP_998308.1 Gene:arih2 / 406417 ZFINID:ZDB-GENE-040426-2158 Length:492 Species:Danio rerio


Alignment Length:510 Identity:171/510 - (33%)
Similarity:266/510 - (52%) Gaps:56/510 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 NSEMEFSDEDHGDSHRSLLTHMSCENDSDSEDTCTEILLPENSNSPETEDF---VYKVLSVDQIV 63
            |.|.|..|||.|:..   :.|.   .|:..||...     |....||...|   .|:        
Zfish    13 NEEFEDDDEDIGEGD---IPHY---YDNLEEDVAV-----EEPFDPEKYQFNCLTYR-------- 58

  Fly    64 QHQRNIIDEVNNV---LNLPPQVTRIILNHFKWDKESLFENYFESNPKDFFQRAHVLNPFEKKIE 125
            :.||.:.::||||   |.:.|.|.:::|.||.|....:.|.| :||.......|:. .|  ....
Zfish    59 ESQRVLTEQVNNVASALKVSPAVAKLVLVHFHWQVVQILERY-KSNSSQLLCEAYA-QP--TTTC 119

  Fly   126 RESAASTSCAIPQLCGIC--FCSCDELIGLGCGHNFCAACWKQYLANKTCS----EGLANTIKCP 184
            |...|.||..    ||:|  ....|.|:.|.|.|:||..||:|:     |:    :|:...|.|.
Zfish   120 RSLTAGTSLQ----CGVCLQLVRRDALLSLPCQHSFCKGCWEQH-----CTVLVKDGVGVEISCM 175

  Fly   185 AANCEILVDYISFLKLADDSEVVERYQQLITNTFVECNMLMRWCPAPNCSHAVKAVCAEPRA--V 247
            |.:|.:.:.....|.|....|:.::|::.:...:||.:..::.||..:|...::.  .||||  |
Zfish   176 AQDCSLRMPEDFVLPLLPSEELKDKYRRYLFRDYVESHFQLQLCPGADCPIVIQV--QEPRARRV 238

  Fly   248 LC-KCGHEFCFACGENWHEPASCSSLKKWVKKCLEDSETSNWIAQNTKECPKCNVTIEKDGGCNH 311
            .| :|...|||.|.:.:|.|..|::::||:.||.:||||:|:|:.:||:|||||:.|||:|||||
Zfish   239 QCSRCEEVFCFKCRQMYHAPTDCATIRKWLTKCADDSETANYISAHTKDCPKCNICIEKNGGCNH 303

  Fly   312 MVCKNPSCRYDFCWVCLGSWEPHGSSWYSCNRFDEEEAKQARLAQQKYRSSMARYLHYYNRYSNH 376
            |.|.  .|::||||:|||.|:.|||.:|.|:|:.|......:..|.:.|.::.:||.|:.|:.||
Zfish   304 MQCS--KCKHDFCWMCLGDWKTHGSEYYECSRYKENPDIVNQSQQAQAREALKKYLFYFERWENH 366

  Fly   377 MQSLKMENKLYSNIQAKMDD--MQEEMSWIEVQFLRDAVDVLCQCRTTLMYSYVFAFYLMNNNQK 439
            .:||::|.:.|..||.|:.:  |....:||:.|:|::|..:|.:||.||.|:|.:|:|:.:..:|
Zfish   367 NKSLQLEAQTYQRIQEKIQERVMNNLGTWIDWQYLQNAAKLLAKCRYTLQYTYPYAYYMESGPRK 431

  Fly   440 IIFEDNQKDMEMATEKLSECLEREITVKNIYEVKQKVLDLS---HYCQKRRHVLL 491
            .:||..|..:|...|.||..:||..|.:..........||.   |..:::|..||
Zfish   432 KLFEYQQAQLEAEIENLSWKVERADTYERGEPSANDRGDLENQMHIAEQKRRTLL 486

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12362NP_648392.1 IBR 208..269 CDD:214763 19/63 (30%)
IBR 273..331 CDD:279784 35/57 (61%)
arih2NP_998308.1 IBR 199..261 CDD:214763 19/63 (30%)
IBR <289..321 CDD:279784 22/33 (67%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54219
OrthoDB 1 1.010 - - D429758at33208
OrthoFinder 1 1.000 - - FOG0000379
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
54.930

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