DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG12362 and Arih2

DIOPT Version :9

Sequence 1:NP_648392.1 Gene:CG12362 / 39193 FlyBaseID:FBgn0036082 Length:511 Species:Drosophila melanogaster
Sequence 2:NP_001012275.1 Gene:Arih2 / 316005 RGDID:1305839 Length:492 Species:Rattus norvegicus


Alignment Length:517 Identity:157/517 - (30%)
Similarity:271/517 - (52%) Gaps:61/517 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MNSEMEFSDEDHGDSHRSLLTHMSCENDSDSEDTCTEI----------LLPENSNSPETEDFVYK 55
            |||:...|:|:..|.        :||.:.:.|:...:|          :..:.:::.:.|::.:.
  Rat     5 MNSQGSDSNEEDYDP--------NCEEEEEEEEDPGDIEDYYVGVASDVEQQGADAFDPEEYQFT 61

  Fly    56 VLSVDQ----IVQHQRNIIDEVNNVLNLPPQVTRIILNHFKWDKESLFENYFESNPKDFFQRAHV 116
            .|:..:    :.:|..::.    :.|.:...|.::||.:|.|....:.:.| .||.......|.|
  Rat    62 CLTYKESEGALHEHMTSLA----SALKVSHSVAKLILVNFHWQVSEILDRY-RSNSAQLLVEARV 121

  Fly   117 L-NPFEKKIERESAASTSCAIPQLCGIC--FCSCDELIGLGCGHNFCAACWKQYLANKTCS---- 174
            . ||        |....:...|..|.:|  |...:.|:.|.|.|.||.:||:|:     ||    
  Rat   122 QPNP--------SKHVPTAHPPHHCAVCMQFVRKENLLSLTCQHQFCRSCWEQH-----CSVLVK 173

  Fly   175 EGLANTIKCPAANCEILVDYISFLKLADDSEVVERYQQLITNTFVECNMLMRWCPAPNCSHAVKA 239
            :|:...|.|.|.:|.:.........|..:.|:.::|::.:...:||.:..::.||..:|...::.
  Rat   174 DGVGVGISCMAQDCPLRTPEDFVFPLLPNEELRDKYRRYLFRDYVESHYQLQLCPGADCPMVIRV 238

  Fly   240 VCAEPRA--VLC-KCGHEFCFACGENWHEPASCSSLKKWVKKCLEDSETSNWIAQNTKECPKCNV 301
              .||||  |.| :|...|||.|.:.:|.|..|::::||:.||.:||||:|:|:.:||:|||||:
  Rat   239 --QEPRARRVQCNRCNEVFCFKCRQMYHAPTDCATIRKWLTKCADDSETANYISAHTKDCPKCNI 301

  Fly   302 TIEKDGGCNHMVCKNPSCRYDFCWVCLGSWEPHGSSWYSCNRFDEEEAKQARLAQQKYRSSMARY 366
            .|||:||||||.|.  .|::||||:|||.|:.|||.:|.|:|:.|......:..|.:.|.::.:|
  Rat   302 CIEKNGGCNHMQCS--KCKHDFCWMCLGDWKTHGSEYYECSRYKENPDIVNQSQQAQAREALKKY 364

  Fly   367 LHYYNRYSNHMQSLKMENKLYSNIQAKMDD--MQEEMSWIEVQFLRDAVDVLCQCRTTLMYSYVF 429
            |.|:.|:.||.:||::|.:.|..|..|:.:  |....:||:.|:|::|..:|.:||.||.|:|.:
  Rat   365 LFYFERWENHNKSLQLEAQTYQRIHEKIQERVMNNLGTWIDWQYLQNAAKLLAKCRYTLQYTYPY 429

  Fly   430 AFYLMNNNQKIIFEDNQKDMEMATEKLSECLEREITVKNIYEVKQKVLDLSHYCQKRRHVLL 491
            |:|:.:..:|.:||..|..:|...|.||..:||    .:.|: :..:.:..|..::||..||
  Rat   430 AYYMESGPRKKLFEYQQAQLEAEIENLSWKVER----ADSYD-RGDLENQMHIAEQRRRTLL 486

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12362NP_648392.1 IBR 208..269 CDD:214763 19/63 (30%)
IBR 273..331 CDD:279784 35/57 (61%)
Arih2NP_001012275.1 RING-HC_RBR_TRIAD1 136..189 CDD:319687 19/57 (33%)
IBR 207..269 CDD:214763 19/63 (30%)
IBR <297..329 CDD:396187 22/33 (67%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54219
OrthoDB 1 1.010 - - D429758at33208
OrthoFinder 1 1.000 - - FOG0000379
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.930

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