DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12362 and Rnf19a

DIOPT Version :9

Sequence 1:NP_648392.1 Gene:CG12362 / 39193 FlyBaseID:FBgn0036082 Length:511 Species:Drosophila melanogaster
Sequence 2:NP_038951.1 Gene:Rnf19a / 30945 MGIID:1353623 Length:840 Species:Mus musculus


Alignment Length:359 Identity:85/359 - (23%)
Similarity:143/359 - (39%) Gaps:90/359 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 DSHRSLLT------HMSCENDSDSEDTCTEILLPENSNSPETEDFVYKVLSVDQIVQHQRNI--- 69
            ||...|::      |....:|.|.:.:.:.:.||....:|:     .:.:|:..:.:.:::.   
Mouse    21 DSDSILMSILDMSLHQQMGSDRDLQSSTSSVSLPSVKKAPK-----QRRISIGSLFRRKKDSKRK 80

  Fly    70 -------IDEVNNVLNLPPQVTRIILNHFKWDKESLF------ENYFESNPK---DFFQRAHVLN 118
                   :|.:.::.::..::..        ||.|:|      :|...|..|   ||.:      
Mouse    81 SRELNGGVDGIASIESIHSEMCA--------DKNSIFSTNTSSDNGLTSISKQIGDFIE------ 131

  Fly   119 PFEKKIERESAASTSCAIPQLCGICFC--SCDELIG-LGCGHNFCAACWKQYLANKTCSEGLANT 180
                                 |.:|..  |.|.... :.|.|..|..|.:|||..: .||...| 
Mouse   132 ---------------------CPLCLLRHSKDRFPDIMTCHHRSCVDCLRQYLRIE-ISESRVN- 173

  Fly   181 IKCPAANCEILVDYISFLKLADDSEVVERYQQLITNTFVECNMLMRWCPAPNCSHAVKAV-CAEP 244
            |.||  .|....:......:..|..::|:|::.:...::..:...||||||:|.:||.|. ||..
Mouse   174 ISCP--ECTERFNPHDIRLILSDDVLMEKYEEFMLRRWLVADPDCRWCPAPDCGYAVIAFGCASC 236

  Fly   245 RAVLC---KCGHEFCFACGENWHEPASCSS----------LKKWVKKCLEDSETSNWIAQNTKEC 296
            ..:.|   .||.|||:.|.:.||...:|.:          |:......:..|:.|...|.:.|.|
Mouse   237 PKLTCGREGCGTEFCYHCKQIWHPNQTCDAARQERAQSLRLRTIRSSSISYSQESGAAADDIKPC 301

  Fly   297 PKCNVTIEK--DGGCNHMVCKNPSCRYDFCWVCL 328
            |:|...|.|  ||.||||.|  ..|..:|||:|:
Mouse   302 PRCAAYIIKMNDGSCNHMTC--AVCGCEFCWLCM 333

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12362NP_648392.1 IBR 208..269 CDD:214763 23/64 (36%)
IBR 273..331 CDD:279784 21/58 (36%)
Rnf19aNP_038951.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 40..61 4/20 (20%)
TRIAD supradomain. /evidence=ECO:0000255|PROSITE-ProRule:PRU01221 128..351 67/239 (28%)
RING 132..179 CDD:214546 17/50 (34%)
IBR 199..264 CDD:214763 23/64 (36%)
IBR <297..335 CDD:279784 18/39 (46%)
AzlC <361..450 CDD:294385
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 625..685
Interaction with CASR. /evidence=ECO:0000250 660..840
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 700..721
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 786..808
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1815
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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