DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12362 and Rnf217

DIOPT Version :10

Sequence 1:NP_648392.1 Gene:CG12362 / 39193 FlyBaseID:FBgn0036082 Length:511 Species:Drosophila melanogaster
Sequence 2:NP_001099674.1 Gene:Rnf217 / 292188 RGDID:1306836 Length:284 Species:Rattus norvegicus


Alignment Length:248 Identity:60/248 - (24%)
Similarity:88/248 - (35%) Gaps:58/248 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   139 LCGICF-------CSCDELIGLGCGHNFCAACWKQYLANKTCSEGLANTIKCPAANC-EILVDYI 195
            :|.:|.       ..|       |....|..|.|.||:::. ..|... ||||...| |.|.:..
  Rat     4 MCRVCLEDKPIKPLPC-------CKKAVCEECLKIYLSSQV-QLGQVE-IKCPVTECFEFLEETT 59

  Fly   196 SFLKLADDSEVVERYQQLITNTFVECNML-MRWCPAPNCSHAV----KAVCAEPR------AVLC 249
            ....|..:..:..:|       |:|...: ....|.|.|.|..    |.....|.      .:.|
  Rat    60 VVYNLTHEDSIKYKY-------FLELGRIDSSTKPCPQCKHFTTFKKKGHIPTPSRSESRYKIQC 117

  Fly   250 -KCGHEFCFACGENWHEPASCSSLKKWVKKCLEDSETSNWIAQ------NTKECPKCNVTIEKDG 307
             .|...:||.|...|||..:|...:|      .|....:|.::      |.::||||.:.|::..
  Rat   118 PTCQFIWCFKCHSPWHEGVNCKEYRK------GDKLLRHWASEIEHGQRNAQKCPKCKIHIQRTE 176

  Fly   308 GCNHMVCKNPSCRYDFCWVCLGSWEPHGSSWYSCNRFDEEEAKQARLAQQKYR 360
            ||:||.|.  .|..:||:.|        ...|...||..:......:...|||
  Rat   177 GCDHMTCS--QCNTNFCYRC--------GERYRQLRFFGDHTSNLSIFGCKYR 219

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12362NP_648392.1 RING-HC_RBR_HHARI 138..194 CDD:438288 17/62 (27%)
BRcat_RBR_HHARI-like 203..284 CDD:439004 20/92 (22%)
Rcat_RBR_HHARI-like 288..345 CDD:439017 18/62 (29%)
Ariadne 346..>480 CDD:466073 3/15 (20%)
Rnf217NP_001099674.1 RING_Ubox 3..51 CDD:473075 14/55 (25%)
BRcat_RBR_RNF217 80..154 CDD:439003 18/79 (23%)
Rcat_RBR_RNF217 158..225 CDD:439011 21/72 (29%)

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