DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG12362 and RNF144B

DIOPT Version :10

Sequence 1:NP_648392.1 Gene:CG12362 / 39193 FlyBaseID:FBgn0036082 Length:511 Species:Drosophila melanogaster
Sequence 2:NP_877434.2 Gene:RNF144B / 255488 HGNCID:21578 Length:303 Species:Homo sapiens


Alignment Length:210 Identity:67/210 - (31%)
Similarity:92/210 - (43%) Gaps:37/210 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   140 CGICFC--SCDELIGL-GCGHNFCAACWKQYLANKTCSEGLANTIKCPAANC----EILVDYISF 197
            |.:|.|  |.|::..| .|...||.||.|||: .....||..:.|.||...|    .:....|:.
Human    30 CKLCLCEQSLDKMTTLQECQCIFCTACLKQYM-QLAIREGCGSPITCPDMVCLNHGTLQEAEIAC 93

  Fly   198 LKLADDSEVVERYQQLITNTFVECNMLMRWCPAPNCSHAVKAVC-------AEPRAVLC-KCGHE 254
            |...|..::   ||:|.....|..:....|||..:|    :.||       .:|..|.| .|..:
Human    94 LVPVDQFQL---YQRLKFEREVHLDPYRTWCPVADC----QTVCPVASSDPGQPVLVECPSCHLK 151

  Fly   255 FCFACGENWHEPASCSSLKKWV----KKCL--EDSETSNWIAQNTKECPKCNVTIEKDGGCNHMV 313
            ||..|.:.||...||...:..|    .:.|  .|:|..      .|:||.|.|.||::.||..|:
Human   152 FCSCCKDAWHAEVSCRDSQPIVLPTEHRALFGTDAEAP------IKQCPVCRVYIERNEGCAQMM 210

  Fly   314 CKNPSCRYDFCWVCL 328
            |||  |::.|||.||
Human   211 CKN--CKHTFCWYCL 223

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12362NP_648392.1 RING-HC_RBR_HHARI 138..194 CDD:438288 20/60 (33%)
BRcat_RBR_HHARI-like 203..284 CDD:439004 24/94 (26%)
Rcat_RBR_HHARI-like 288..345 CDD:439017 19/41 (46%)
Ariadne 346..>480 CDD:466073
RNF144BNP_877434.2 TRIAD supradomain. /evidence=ECO:0000255|PROSITE-ProRule:PRU01221 26..244 67/210 (32%)
mRING-HC-C4C4_RBR_RNF144B 28..84 CDD:438434 20/54 (37%)
BRcat_RBR_RNF144B 111..174 CDD:439028 18/66 (27%)
Rcat_RBR_RNF144B 185..255 CDD:439030 21/47 (45%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.