DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12362 and F56D2.2

DIOPT Version :9

Sequence 1:NP_648392.1 Gene:CG12362 / 39193 FlyBaseID:FBgn0036082 Length:511 Species:Drosophila melanogaster
Sequence 2:NP_001367432.1 Gene:F56D2.2 / 175770 WormBaseID:WBGene00018964 Length:484 Species:Caenorhabditis elegans


Alignment Length:385 Identity:82/385 - (21%)
Similarity:142/385 - (36%) Gaps:117/385 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 MSCENDSDSEDTCT---EILLP----------------------------ENSNSPETEDFVYKV 56
            ::.|..|||.|..:   :||.|                            |...|.|||  :.::
 Worm    54 VTIEGTSDSSDHFSIPLDILPPIRLKFHLPNDYPSVSSPKLELESYWMNQEQMTSCETE--LARI 116

  Fly    57 LSVDQIVQ----HQRNIIDEVN----NVLNLPPQVTRIILNHFKWDKESLFENYFESNPKDFFQR 113
            ...:|:::    ..:.|||.::    .::||              ::....:|..|:        
 Worm   117 CEENQMMEVLFMCYQTIIDSIDQSHLKIINL--------------NEACALKNNGET-------- 159

  Fly   114 AHVLNPFEKKI--ERESAASTSCAIPQL-CGICFCSCDELIG------LGCGHNFCAACWKQYLA 169
               :...:|||  :.|.||......... |.:|:   |..:|      ..|.|.||..|...|. 
 Worm   160 ---IESLKKKILGKGEEAAEEHFVNTLFDCEVCY---DSQMGQHCIKFQPCSHVFCKQCTFDYY- 217

  Fly   170 NKTCSEG-LANTIKCPAANCEILVDYISFLKLADDSEVVERYQQLITNTFVECNMLMRWCPAPNC 233
             :|.|:| ::..::|.|..|:..... :.:|.|...::..:|:.::....:........||..||
 Worm   218 -RTISKGVVSKAMQCLAEGCKSEAQQ-NTVKEALGDDLYAKYETIMLEKAIREMEDTVECPRENC 280

  Fly   234 SHAVKAVCAEPRAVLCKCGH---EFCFACGENWHEPASCS--------SLKKW------------ 275
            ...  |...:.:..|.:|.:   .||..|.:.:|....|.        .:|:|            
 Worm   281 QKV--AYVTDRQRFLAECSYCNFSFCNLCKQTFHGIERCKWKKGDKELLVKRWKDGDEAEKAEMC 343

  Fly   276 --------VKKCLEDSETSNWIAQNTKECPKCNVTIEKDGGCNHMVCKNPSCRYDFCWVC 327
                    |::.:|......|:..|:|.||||:|:|||:.||:.|.|  ..|...|||:|
 Worm   344 RQFGGEKRVEELVERFLNEEWLDSNSKPCPKCSVSIEKNEGCHKMHC--TKCDTYFCWLC 401

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12362NP_648392.1 IBR 208..269 CDD:214763 12/63 (19%)
IBR 273..331 CDD:279784 24/75 (32%)
F56D2.2NP_001367432.1 RWD 12..140 CDD:214735 17/87 (20%)
RING_Ubox 184..237 CDD:418438 15/57 (26%)
IBR 255..317 CDD:214763 12/63 (19%)
IBR 357..401 CDD:396187 20/45 (44%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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