DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Or67c and Or42a

DIOPT Version :9

Sequence 1:NP_524018.2 Gene:Or67c / 39189 FlyBaseID:FBgn0036078 Length:404 Species:Drosophila melanogaster
Sequence 2:NP_523622.2 Gene:Or42a / 35514 FlyBaseID:FBgn0033041 Length:406 Species:Drosophila melanogaster


Alignment Length:424 Identity:77/424 - (18%)
Similarity:158/424 - (37%) Gaps:97/424 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 IYAHRSTNPLKSLLFKIYL----------------YAGFINFNLLV---------IGELVFFYNS 69
            :|.....:|::|....:||                :..::.::..:         ||.|..:.:.
  Fly    10 LYTQSKDSPVRSRDATLYLLRCVFLMGVRKPPAKFFVAYVLWSFALNFCSTFYQPIGFLTGYISH 74

  Fly    70 IQDFE------TIRLAIAVAPC-----IGFSLVADFKQAAMIRGKKTLIMLLDDLENMHPKTLAK 123
            :.:|.      ::::|.....|     |.::||..|.:|                     ..|..
  Fly    75 LSEFSPGEFLTSLQVAFNAWSCSTKVLIVWALVKRFDEA---------------------NNLLD 118

  Fly   124 QMEYKLPDFEKTMK---------RVINIFTFLCLAYTTTFSFYPAIKASVKFNFLGYDTFDRNFG 179
            :|:.::.|..:.::         |:...|..:.:.|.|. :|..||       |:|...:...:.
  Fly   119 EMDRRITDPGERLQIHRAVSLSNRIFFFFMAVYMVYATN-TFLSAI-------FIGRPPYQNYYP 175

  Fly   180 FLIWFPFDATRNNLIYWIMYWDIAHGAYLAGIAF--LCADLLLVVVITQICMHFNYISMRLE--- 239
            ||.|      |::.::..:...:.:.| :||..|  :|.|...|..:..:..|.:..:.||.   
  Fly   176 FLDW------RSSTLHLALQAGLEYFA-MAGACFQDVCVDCYPVNFVLVLRAHMSIFAERLRRLG 233

  Fly   240 DHPCNSNEDKENIEFLIGIIRYHDKCLKLCEHVNDLYSFSLLLNFLMASMQICF-----IAFQVT 299
            .:|..|.|.|  .|.|:..|:.|...|:..:.:..:.|.::.:.||:..:.:.|     :.|...
  Fly   234 TYPYESQEQK--YERLVQCIQDHKVILRFVDCLRPVISGTIFVQFLVVGLVLGFTLINIVLFANL 296

  Fly   300 ESTVEVIIIYCIFLMTSMVQVFMVCYYGDTLIAASLKVGDAAYNQKWFQCSKSYCTMLKLLIMRS 364
            .|.:..:    .|:...:::....|...:.|.....|:.||.:...|....|.|...|...:.:.
  Fly   297 GSAIAAL----SFMAAVLLETTPFCILCNYLTEDCYKLADALFQSNWIDEEKRYQKTLMYFLQKL 357

  Fly   365 QKPASIRPPTFPPISLVTYMKVISMSYQFFALLR 398
            |:|.:.......|||:.|.:.|...|:..|.|::
  Fly   358 QQPITFMAMNVFPISVGTNISVTKFSFSVFTLVK 391

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Or67cNP_524018.2 7tm_6 86..391 CDD:251636 63/323 (20%)
Or42aNP_523622.2 7tm_6 79..384 CDD:251636 65/346 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45465909
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR21137
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.940

Return to query results.
Submit another query.