DRSC/TRiP Functional Genomics Resources

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Protein Alignment Or67c and Or1a

DIOPT Version :10

Sequence 1:NP_524018.2 Gene:Or67c / 39189 FlyBaseID:FBgn0036078 Length:404 Species:Drosophila melanogaster
Sequence 2:NP_525029.2 Gene:Or1a / 30978 FlyBaseID:FBgn0029521 Length:392 Species:Drosophila melanogaster


Alignment Length:322 Identity:67/322 - (20%)
Similarity:117/322 - (36%) Gaps:76/322 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 YRTIGEDIYAHRSTNPLKS-LLFKIYLYAGFINFNLLVIGELVFFYNSIQDFETIRLAIAVAPCI 86
            :..:|.|:...:..|.|:| ||:.|....  .:|.|..:...:     :|:...|.|. :.|...
  Fly    19 FARMGLDLQPDKKGNVLRSPLLYCIMCLT--TSFELCTVCAFM-----VQNRNQIVLC-SEALMH 75

  Fly    87 GFSLVAD-FKQAAMIRGKKTLIMLLDDLENMHPKTLAKQMEYKLPDFEKTMKRVIN--------I 142
            |..:|:. .|.|..:.....|:.|:..:          |..:...|...|..|..|        |
  Fly    76 GLQMVSSLLKMAIFLAKSHDLVDLIQQI----------QSPFTEEDLVGTEWRSQNQRGQLMAAI 130

  Fly   143 FTFLCLAYTTTFSFYPAIKASVKFNFLGYDTFDRNFGFLIWFPFDATRNNLIYWIMYWDIAHGAY 207
            :..:|...:.:|...|.....:|::..|  .|.....|.:..|:|.|:.:    :...|.....:
  Fly   131 YFMMCAGTSVSFLLMPVALTMLKYHSTG--EFAPVSSFRVLLPYDVTQPH----VYAMDCCLMVF 189

  Fly   208 LAGIAFLC-----ADLLLVVVITQICMHFNYISMRLEDHPCNSNEDKENIEFLIGIIRYHDKCLK 267
            :  ::|.|     .|.|.......:.:.:..:..:|:..|...|..:.:.. |.||...|.:.||
  Fly   190 V--LSFFCCSTTGVDTLYGWCALGVSLQYRRLGQQLKRIPSCFNPSRSDFG-LSGIFVEHARLLK 251

  Fly   268 LCEHVNDLYSFSLLLNFLMASMQICFIAFQVTESTVEVIII---YCIFLMTSMVQVFMVCYY 326
            :.:|.|  |||          |:|.|         |||:||   ||          .::|.|
  Fly   252 IVQHFN--YSF----------MEIAF---------VEVVIICGLYC----------SVICQY 282

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Or67cNP_524018.2 7tm_6 86..391 CDD:251636 53/258 (21%)
Or1aNP_525029.2 7tm_6 79..376 CDD:251636 52/254 (20%)

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