DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG32055 and AT1G17230

DIOPT Version :9

Sequence 1:NP_729599.1 Gene:CG32055 / 39188 FlyBaseID:FBgn0052055 Length:534 Species:Drosophila melanogaster
Sequence 2:NP_001322898.1 Gene:AT1G17230 / 838294 AraportID:AT1G17230 Length:1133 Species:Arabidopsis thaliana


Alignment Length:582 Identity:147/582 - (25%)
Similarity:217/582 - (37%) Gaps:173/582 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 LSGVFGKDLQECEDLG-----------------------NGSYLCREIESFEQLNRYVGKNWKSV 53
            :||...:||..|..|.                       ...||| |...|..:.|.:| |..|:
plant   103 ISGPIPQDLSLCRSLEVLDLCTNRFHGVIPIQLTMIITLKKLYLC-ENYLFGSIPRQIG-NLSSL 165

  Fly    54 KVV----NEHTGIERAEDGELPGLSTLLQLDLSESG-----GVTLGE-KGLQDFKALQKL-NLTH 107
            :.:    |..||:..      |.::.|.||.:..:|     ||...| .|.:..|.|... ||..
plant   166 QELVIYSNNLTGVIP------PSMAKLRQLRIIRAGRNGFSGVIPSEISGCESLKVLGLAENLLE 224

  Fly   108 AQLDELKSEQFPNPSEMINF-------------DVSYNDILAITTKLMSG--------------- 144
            ..|.: :.|:..|.:::|.:             ::|..::||:.....:|               
plant   225 GSLPK-QLEKLQNLTDLILWQNRLSGEIPPSVGNISRLEVLALHENYFTGSIPREIGKLTKMKRL 288

  Fly   145 --------------FGNLVYA---NFSENLIAVIEPNAFRHMKNLRFLDLTTNYQENI------- 185
                          .|||:.|   :||||.:....|..|.|:.||:.|.|.    |||       
plant   289 YLYTNQLTGEIPREIGNLIDAAEIDFSENQLTGFIPKEFGHILNLKLLHLF----ENILLGPIPR 349

  Fly   186 TLGENANLRFLSISNNNLRDFQWCHLRVLPKLEELHLHSNWLEHLDMGIFYALPNLRVLNVSNNN 250
            .|||...|..|.:|.|.|.......|:.||.|.:|.|..|.||                      
plant   350 ELGELTLLEKLDLSINRLNGTIPQELQFLPYLVDLQLFDNQLE---------------------- 392

  Fly   251 LFEIKRTLFMAPGEIAPL-------ELLDYSSNIVKVLDDSVFCRLKKLRTLNLWLNQINRIHPR 308
                        |:|.||       .:||.|:|.:.....:.|||.:.|..|:|..|:::...||
plant   393 ------------GKIPPLIGFYSNFSVLDMSANSLSGPIPAHFCRFQTLILLSLGSNKLSGNIPR 445

  Fly   309 AFLGLSSLQTLHLQGNKIS-ILPDDVF--ANLTALE----------KLDLSK-NNIQKLGL---R 356
            ......||..|.|..|::: .||.::|  .||||||          ..||.| .|:::|.|   .
plant   446 DLKTCKSLTKLMLGDNQLTGSLPIELFNLQNLTALELHQNWLSGNISADLGKLKNLERLRLANNN 510

  Fly   357 VFGE-----RILRKLIYLDLSNNYIADLHPLALSSMPFIKELRLRRNRLVSLDLRMFAPLRQLQL 416
            ..||     ..|.|::..::|:|.:....|..|.|...|:.|.|..|:......:....|..|::
plant   511 FTGEIPPEIGNLTKIVGFNISSNQLTGHIPKELGSCVTIQRLDLSGNKFSGYIAQELGQLVYLEI 575

  Fly   417 LTINENRLEEIDGEI---LDTLDRLNHLELNNNRLT-----FLPDLKSSQNLLQLRNITLEG 470
            |.:::|||   .|||   ...|.||..|:|..|.|:     .|..|.|.|..|.:.:..|.|
plant   576 LRLSDNRL---TGEIPHSFGDLTRLMELQLGGNLLSENIPVELGKLTSLQISLNISHNNLSG 634

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG32055NP_729599.1 leucine-rich repeat 76..99 CDD:275380 8/28 (29%)
leucine-rich repeat 100..123 CDD:275380 6/23 (26%)
LRR_8 128..180 CDD:290566 19/83 (23%)
leucine-rich repeat 128..147 CDD:275380 4/47 (9%)
leucine-rich repeat 148..171 CDD:275380 9/25 (36%)
leucine-rich repeat 172..192 CDD:275380 9/26 (35%)
LRR_RI <187..400 CDD:238064 67/241 (28%)
LRR_8 192..251 CDD:290566 14/58 (24%)
leucine-rich repeat 193..216 CDD:275380 7/22 (32%)
leucine-rich repeat 217..240 CDD:275380 6/22 (27%)
leucine-rich repeat 241..267 CDD:275380 2/25 (8%)
leucine-rich repeat 268..291 CDD:275380 8/29 (28%)
LRR_8 290..350 CDD:290566 23/73 (32%)
leucine-rich repeat 292..315 CDD:275380 6/22 (27%)
leucine-rich repeat 316..339 CDD:275380 9/25 (36%)
LRR_8 340..400 CDD:290566 21/78 (27%)
leucine-rich repeat 340..365 CDD:275380 11/43 (26%)
leucine-rich repeat 366..389 CDD:275380 5/22 (23%)
leucine-rich repeat 390..413 CDD:275380 5/22 (23%)
LRR_8 391..448 CDD:290566 18/59 (31%)
leucine-rich repeat 414..437 CDD:275380 9/25 (36%)
AT1G17230NP_001322898.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
00.000

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