DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG32055 and AT5G48940

DIOPT Version :9

Sequence 1:NP_729599.1 Gene:CG32055 / 39188 FlyBaseID:FBgn0052055 Length:534 Species:Drosophila melanogaster
Sequence 2:NP_199705.2 Gene:AT5G48940 / 834952 AraportID:AT5G48940 Length:1135 Species:Arabidopsis thaliana


Alignment Length:587 Identity:152/587 - (25%)
Similarity:244/587 - (41%) Gaps:109/587 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MQALQVLALLLLSGVFGK---DLQECEDLGN----GSYLCR-------EIESFEQLNRYVGKNWK 51
            ::.||.|. |..:|:.||   :|.:|..|.|    .:||..       :|.:.|.: |..|.:..
plant   153 LKNLQELC-LNSNGLTGKIPPELGDCVSLKNLEIFDNYLSENLPLELGKISTLESI-RAGGNSEL 215

  Fly    52 SVKVVNEHTGIERAEDGELPGLSTLLQLDLSESGGVTLGEKGLQDFKALQKLNLTHAQLDELKSE 116
            |.|:..|   |....:.::.||:.   ..:|.|..|:||:     ...||.|::....|.....:
plant   216 SGKIPEE---IGNCRNLKVLGLAA---TKISGSLPVSLGQ-----LSKLQSLSVYSTMLSGEIPK 269

  Fly   117 QFPNPSEMINFDVSYNDILAITTKLMSGFGNLVYANFSENLIAVIEPNAFRHMKNLRFLDLTTNY 181
            :..|.||:||..:..||:.....|.:....||......:|.:....|.....||:|..:||:.||
plant   270 ELGNCSELINLFLYDNDLSGTLPKELGKLQNLEKMLLWQNNLHGPIPEEIGFMKSLNAIDLSMNY 334

  Fly   182 QENI---TLGENANLRFLSISNNNLRDFQWCHLRVLPKLEELHLHSNWLEHL---------DMGI 234
            ....   :.|..:||:.|.:|:||:.......|....||.:..:.:|.:..|         ::.|
plant   335 FSGTIPKSFGNLSNLQELMLSSNNITGSIPSILSNCTKLVQFQIDANQISGLIPPEIGLLKELNI 399

  Fly   235 FYALPNLRVLNVSNNNLFEIKRTLFMAPGEIA---PLELLDYSSN-IVKVLDDSVFCRLKKLRTL 295
            |....|....|:               |.|:|   .|:.||.|.| :...|...:| :|:.|..|
plant   400 FLGWQNKLEGNI---------------PDELAGCQNLQALDLSQNYLTGSLPAGLF-QLRNLTKL 448

  Fly   296 NLWLNQINRIHPRAFLGLSSLQTLHLQGNKIS-ILPDDVFANLTALEKLDLSKNNIQ-KLGLRVF 358
            .|..|.|:.:.|......:||..|.|..|:|: .:|..: ..|..|..||||:||:. .:.|.:.
plant   449 LLISNAISGVIPLEIGNCTSLVRLRLVNNRITGEIPKGI-GFLQNLSFLDLSENNLSGPVPLEIS 512

  Fly   359 GERILRKLIYLDLSNNYIADLHPLALSSMPFIKELRLRRN-----------RLVSLDLRMFAP-- 410
            .   .|:|..|:||||.:....||:|||:..::.|.:..|           .|:||:..:.:.  
plant   513 N---CRQLQMLNLSNNTLQGYLPLSLSSLTKLQVLDVSSNDLTGKIPDSLGHLISLNRLILSKNS 574

  Fly   411 -----------LRQLQLLTINENRLE-EIDGEILDTLDRLNHLELNNNRLT-FLPDLKSSQNLLQ 462
                       ...||||.::.|.:. .|..|:.|..|....|.|:.|.|. |:|:..|:.|.|.
plant   575 FNGEIPSSLGHCTNLQLLDLSSNNISGTIPEELFDIQDLDIALNLSWNSLDGFIPERISALNRLS 639

  Fly   463 LRNIT---LEGNPWQCLCLDEITSWLNGRHVSYARPSSAYFSGRKPLCVVTPMDKCLRDLQETKA 524
            :.:|:   |.|:......|:.:.| ||   :|:.|     |||      ..|..|..|.|...:.
plant   640 VLDISHNMLSGDLSALSGLENLVS-LN---ISHNR-----FSG------YLPDSKVFRQLIGAEM 689

  Fly   525 QG 526
            :|
plant   690 EG 691

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG32055NP_729599.1 leucine-rich repeat 76..99 CDD:275380 5/22 (23%)
leucine-rich repeat 100..123 CDD:275380 5/22 (23%)
LRR_8 128..180 CDD:290566 12/51 (24%)
leucine-rich repeat 128..147 CDD:275380 3/18 (17%)
leucine-rich repeat 148..171 CDD:275380 4/22 (18%)
leucine-rich repeat 172..192 CDD:275380 6/22 (27%)
LRR_RI <187..400 CDD:238064 63/238 (26%)
LRR_8 192..251 CDD:290566 15/67 (22%)
leucine-rich repeat 193..216 CDD:275380 6/22 (27%)
leucine-rich repeat 217..240 CDD:275380 5/31 (16%)
leucine-rich repeat 241..267 CDD:275380 4/28 (14%)
leucine-rich repeat 268..291 CDD:275380 8/23 (35%)
LRR_8 290..350 CDD:290566 20/60 (33%)
leucine-rich repeat 292..315 CDD:275380 6/22 (27%)
leucine-rich repeat 316..339 CDD:275380 7/23 (30%)
LRR_8 340..400 CDD:290566 22/71 (31%)
leucine-rich repeat 340..365 CDD:275380 8/25 (32%)
leucine-rich repeat 366..389 CDD:275380 11/22 (50%)
leucine-rich repeat 390..413 CDD:275380 5/46 (11%)
LRR_8 391..448 CDD:290566 17/81 (21%)
leucine-rich repeat 414..437 CDD:275380 8/23 (35%)
AT5G48940NP_199705.2 PLN00113 16..1063 CDD:215061 152/587 (26%)
leucine-rich repeat 108..131 CDD:275380
leucine-rich repeat 132..155 CDD:275380 0/1 (0%)
leucine-rich repeat 156..182 CDD:275380 10/26 (38%)
leucine-rich repeat 229..252 CDD:275380 7/30 (23%)
leucine-rich repeat 253..276 CDD:275380 5/22 (23%)
leucine-rich repeat 277..300 CDD:275380 5/22 (23%)
leucine-rich repeat 301..324 CDD:275380 4/22 (18%)
leucine-rich repeat 329..348 CDD:275380 5/18 (28%)
leucine-rich repeat 349..372 CDD:275380 6/22 (27%)
leucine-rich repeat 373..396 CDD:275380 3/22 (14%)
leucine-rich repeat 397..420 CDD:275380 7/37 (19%)
leucine-rich repeat 421..444 CDD:275380 8/23 (35%)
leucine-rich repeat 445..468 CDD:275380 6/22 (27%)
leucine-rich repeat 469..492 CDD:275380 7/23 (30%)
leucine-rich repeat 493..516 CDD:275380 8/25 (32%)
leucine-rich repeat 517..540 CDD:275380 11/22 (50%)
leucine-rich repeat 541..562 CDD:275380 2/20 (10%)
leucine-rich repeat 565..588 CDD:275380 1/22 (5%)
leucine-rich repeat 589..637 CDD:275380 16/47 (34%)
leucine-rich repeat 638..660 CDD:275380 5/21 (24%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
00.000

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