DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG32055 and CG18249

DIOPT Version :10

Sequence 1:NP_729599.1 Gene:CG32055 / 39188 FlyBaseID:FBgn0052055 Length:534 Species:Drosophila melanogaster
Sequence 2:NP_001163549.1 Gene:CG18249 / 40964 FlyBaseID:FBgn0037553 Length:559 Species:Drosophila melanogaster


Alignment Length:471 Identity:116/471 - (24%)
Similarity:183/471 - (38%) Gaps:126/471 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   130 SYNDILAITTKLMSGFGNLVYANFSENLIAVIEPNAFRHMKNLRFLDLTTNYQENITLGENANLR 194
            |...|..:..:|..|...||..|.:...|:   ..:.|.::||..|.:     :..:||.     
  Fly    66 SRQSITWLVLQLTPGLRTLVIRNCATYHIS---KESLRPVENLTSLQM-----QGTSLGV----- 117

  Fly   195 FLSISNNNLRDFQWCHLRVLPKLEELHLHSNWLEHLDMGIFYALPNLRVLNVSNNNLFEIKRTLF 259
                    |||..:   ..:|:||.|.|..|::..:.:..|..|..||:|.:..|.:.||   |.
  Fly   118 --------LRDQIF---NAVPRLEILQLSQNFIHTVHVAAFQGLSKLRLLGLQGNAIAEI---LS 168

  Fly   260 MAPGEIAPLELLDYSSNIVKVLDDSVFCRLKKLRTLNLWLNQINRIHPRAF-------------- 310
            .....:..|..||.|.|.:..|..::|.:.|||:||.|..|.:..:.|...              
  Fly   169 STLDPLMELVHLDLSRNELTTLPQNIFAKNKKLQTLLLNGNPLRILMPDVLGSLPNLRLLDLGHA 233

  Fly   311 -------LGLSSLQTL---------------------------HLQ-GNKISILPDDVFANL--- 337
                   |.|:::|.|                           ||| |||.|::..|:..||   
  Fly   234 AELEVMTLNLTNVQNLVLEGSSLSSLVINGGFIKLQAGNNELNHLQVGNKSSVIEMDLHGNLLNG 298

  Fly   338 --TA--------LEKLDLSKNNIQKL-----GLRVFGER---ILRKLIYLDLSNNYIADLHPLA- 383
              ||        |::||||||.|:.|     ||...|.:   ||..|.:|:|:||.:..|.|.: 
  Fly   299 NDTAALLRGMWNLQRLDLSKNRIEALPQHGSGLDASGTQELLILPSLKFLNLANNQLVRLPPESP 363

  Fly   384 -LSSMPFIKELRLRRNRLVSLDLRMFAPLRQLQLLTINENRLEEIDGEILDTLDRLNHLELNNNR 447
             |||.  :..|.|..|.:::||:.:...|..|:.|.:..|||..|           |:.:|:...
  Fly   364 ILSSR--LSYLDLSHNLMLTLDVAILRSLSVLKGLYVEGNRLNTI-----------NYQKLHEEH 415

  Fly   448 LTFLPDLKSSQNLLQLRNITLEGNPWQCLCLDEITSWLNGRHVS-YARPSSAYFSGRKPLCVVTP 511
                |||.         .:.|..|||......::..:...|.|. .|||.:...:....:.:..|
  Fly   416 ----PDLS---------ELGLHDNPWSSGLYRKMFLYFTDRGVHLQARPQNRVLNKSSRVDIDWP 467

  Fly   512 MDKCLRDLQETKAQGI 527
            .::...:.|:....|:
  Fly   468 PNEGQAEAQKMDPPGV 483

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG32055NP_729599.1 leucine-rich repeat 76..99 CDD:275380
leucine-rich repeat 100..123 CDD:275380
LRR_8 126..180 CDD:404697 12/49 (24%)
leucine-rich repeat 128..147 CDD:275380 4/16 (25%)
leucine-rich repeat 148..171 CDD:275380 5/22 (23%)
LRR 171..>486 CDD:443914 99/386 (26%)
leucine-rich repeat 172..192 CDD:275380 4/19 (21%)
leucine-rich repeat 193..216 CDD:275380 3/22 (14%)
leucine-rich repeat 217..240 CDD:275380 7/22 (32%)
leucine-rich repeat 241..267 CDD:275380 7/25 (28%)
leucine-rich repeat 268..291 CDD:275380 7/22 (32%)
leucine-rich repeat 292..315 CDD:275380 8/43 (19%)
leucine-rich repeat 316..339 CDD:275380 12/55 (22%)
leucine-rich repeat 340..365 CDD:275380 14/32 (44%)
leucine-rich repeat 366..389 CDD:275380 10/24 (42%)
leucine-rich repeat 390..413 CDD:275380 6/22 (27%)
leucine-rich repeat 414..437 CDD:275380 6/22 (27%)
CG18249NP_001163549.1 leucine-rich repeat 57..80 CDD:275380 3/13 (23%)
LRR 105..433 CDD:443914 98/377 (26%)
leucine-rich repeat 105..128 CDD:275380 7/43 (16%)
leucine-rich repeat 129..152 CDD:275380 7/22 (32%)
leucine-rich repeat 153..176 CDD:275380 7/25 (28%)
leucine-rich repeat 177..200 CDD:275380 7/22 (32%)
leucine-rich repeat 201..224 CDD:275380 6/22 (27%)
leucine-rich repeat 225..258 CDD:275380 4/32 (13%)
leucine-rich repeat 259..310 CDD:275380 12/50 (24%)
leucine-rich repeat 311..344 CDD:275380 14/32 (44%)
leucine-rich repeat 345..368 CDD:275380 9/22 (41%)
leucine-rich repeat 369..390 CDD:275380 5/20 (25%)
leucine-rich repeat 393..417 CDD:275380 8/38 (21%)
Blue background indicates that the domain is not in the aligned region.

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