DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG32055 and ltl

DIOPT Version :10

Sequence 1:NP_729599.1 Gene:CG32055 / 39188 FlyBaseID:FBgn0052055 Length:534 Species:Drosophila melanogaster
Sequence 2:NP_729265.1 Gene:ltl / 38845 FlyBaseID:FBgn0268063 Length:817 Species:Drosophila melanogaster


Alignment Length:541 Identity:128/541 - (23%)
Similarity:199/541 - (36%) Gaps:148/541 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    87 VTLGEKGLQDFKAL-----QKLN--------LTHAQLDELKSEQFPNPSEMINFD-----VSYND 133
            |.|..:.|:.|.|:     .|||        :||:|||:|:...|.:    :||:     :.:|.
  Fly    36 VELSCEKLESFNAVVDSLANKLNADTNIDLKITHSQLDDLEMRSFTD----MNFNLYKLRMQWNS 96

  Fly   134 ILAITTKLMSGFGNLVYANFSENLIAVIEPNAFRHMKNLRFLDL------------------TTN 180
            :.::......|..|:.|.:..:|.:..|..:|..||.:|..||:                  .||
  Fly    97 LKSLPEVPFRGLSNVTYLSIGDNDLDEIPKHALSHMPSLLTLDIGRCKIRAVQQEDFRGIQRVTN 161

  Fly   181 Y------------------------------------------------QENIT-----LGENAN 192
            .                                                ..|||     |.:...
  Fly   162 LILVSNIITRLDRGSFPKSLLILHLGRNQLESLNGSLHDLHNLESLFINANNITSLDDELPDGGQ 226

  Fly   193 LRFLSISNNNLRDFQWCHLRVLPKLEELHLHSNWLEHLDMGIFYALPNLRVLNVSNNNLFEIKRT 257
            ||.|...||.|.... .::..:..||.:|:|.|.|...|..:..|: ||..:...||.|      
  Fly   227 LRLLMAHNNRLERLP-ANMAGMHSLETVHIHCNQLRSFDRVLRNAV-NLSEVMADNNEL------ 283

  Fly   258 LFMAPGEIA---PLELLDYSSNIVKVLDDSVFCRLKKLRTLNLWLNQINRIHPRAFLGLSSLQTL 319
            .::|..|.|   .:|.|....|.:|.|:.|:. .:.||:..|...|.|.........||.||:||
  Fly   284 EYLAQDEFASCSKVETLQMGCNHIKSLNSSLL-PILKLKNANFSFNDIEEFSMAELHGLRSLKTL 347

  Fly   320 HLQGNKIS-ILPDDVFANLTALEKLDLSKNNIQKLG-----------LRVFGERI---------- 362
            .|..|:|. :|||........|..|||..|.|..|.           |.:.|.|:          
  Fly   348 QLSSNRIQRLLPDPRGVQELMLVNLDLDNNRIDSLNGALAGLGNLRILNLAGNRLEHLQVGDFDG 412

  Fly   363 LRKLIYLDLSNNYIADLHPLALSSMPFIKELRLRRNRLVSLDLRMFAPLRQLQLLTINENRLEEI 427
            :.:|..|||:.|.:|:|.||.::.:|.:|.|::..|.:..|: :.|..|..|....:..|::..|
  Fly   413 MIRLDILDLTGNQLAELKPLEMTLLPSLKILKVAYNNITKLE-QDFKGLPVLCQANLTNNQISTI 476

  Fly   428 DGEILDTLDRLNHLELNNNRLTFLPDLKSSQNLLQLRNITLEGNPWQC-LCLDEITSWLNGRHVS 491
            ..|::......||                  |:.....|.|:.||..| :.|:|:.. |.....:
  Fly   477 SSELVTNTRCKNH------------------NVPGKLEIHLDDNPIMCDVGLNELCR-LMAVQEA 522

  Fly   492 YARPSSAYFSGRKPLCVVTPM 512
            ..|..|..|...:.:|.|.||
  Fly   523 RIRGRSQCFENDQEVCTVLPM 543

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG32055NP_729599.1 leucine-rich repeat 76..99 CDD:275380 4/11 (36%)
leucine-rich repeat 100..123 CDD:275380 10/35 (29%)
LRR_8 126..180 CDD:404697 14/76 (18%)
leucine-rich repeat 128..147 CDD:275380 2/23 (9%)
leucine-rich repeat 148..171 CDD:275380 6/22 (27%)
LRR 171..>486 CDD:443914 94/411 (23%)
leucine-rich repeat 172..192 CDD:275380 9/90 (10%)
leucine-rich repeat 193..216 CDD:275380 6/22 (27%)
leucine-rich repeat 217..240 CDD:275380 8/22 (36%)
leucine-rich repeat 241..267 CDD:275380 7/28 (25%)
leucine-rich repeat 268..291 CDD:275380 6/22 (27%)
leucine-rich repeat 292..315 CDD:275380 6/22 (27%)
leucine-rich repeat 316..339 CDD:275380 9/23 (39%)
leucine-rich repeat 340..365 CDD:275380 10/45 (22%)
leucine-rich repeat 366..389 CDD:275380 9/22 (41%)
leucine-rich repeat 390..413 CDD:275380 6/22 (27%)
leucine-rich repeat 414..437 CDD:275380 4/22 (18%)
ltlNP_729265.1 LRR 65..476 CDD:443914 100/424 (24%)
leucine-rich repeat 65..86 CDD:275380 8/24 (33%)
leucine-rich repeat 87..110 CDD:275380 2/22 (9%)
leucine-rich repeat 111..134 CDD:275380 6/22 (27%)
leucine-rich repeat 135..158 CDD:275380 3/22 (14%)
leucine-rich repeat 159..180 CDD:275380 2/20 (10%)
leucine-rich repeat 181..203 CDD:275380 0/21 (0%)
leucine-rich repeat 204..226 CDD:275380 4/21 (19%)
leucine-rich repeat 227..249 CDD:275380 6/22 (27%)
leucine-rich repeat 250..272 CDD:275380 8/22 (36%)
leucine-rich repeat 273..296 CDD:275380 7/28 (25%)
leucine-rich repeat 297..315 CDD:275380 6/17 (35%)
leucine-rich repeat 320..335 CDD:275378 4/14 (29%)
leucine-rich repeat 344..366 CDD:275380 9/21 (43%)
leucine-rich repeat 367..391 CDD:275380 7/23 (30%)
leucine-rich repeat 392..415 CDD:275380 3/22 (14%)
leucine-rich repeat 416..439 CDD:275380 9/22 (41%)
leucine-rich repeat 440..462 CDD:275380 6/22 (27%)
leucine-rich repeat 463..483 CDD:275380 4/19 (21%)

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