DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG32055 and Rtn4rl2

DIOPT Version :9

Sequence 1:NP_729599.1 Gene:CG32055 / 39188 FlyBaseID:FBgn0052055 Length:534 Species:Drosophila melanogaster
Sequence 2:NP_852045.1 Gene:Rtn4rl2 / 311169 RGDID:727797 Length:420 Species:Rattus norvegicus


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG32055NP_729599.1 leucine-rich repeat 76..99 CDD:275380
leucine-rich repeat 100..123 CDD:275380
LRR_8 128..180 CDD:290566
leucine-rich repeat 128..147 CDD:275380
leucine-rich repeat 148..171 CDD:275380
leucine-rich repeat 172..192 CDD:275380
LRR_RI <187..400 CDD:238064
LRR_8 192..251 CDD:290566
leucine-rich repeat 193..216 CDD:275380
leucine-rich repeat 217..240 CDD:275380
leucine-rich repeat 241..267 CDD:275380
leucine-rich repeat 268..291 CDD:275380
LRR_8 290..350 CDD:290566
leucine-rich repeat 292..315 CDD:275380
leucine-rich repeat 316..339 CDD:275380
LRR_8 340..400 CDD:290566
leucine-rich repeat 340..365 CDD:275380
leucine-rich repeat 366..389 CDD:275380
leucine-rich repeat 390..413 CDD:275380
LRR_8 391..448 CDD:290566
leucine-rich repeat 414..437 CDD:275380
Rtn4rl2NP_852045.1 LRR_8 60..117 CDD:290566
LRR 1 61..82
leucine-rich repeat 62..83 CDD:275380
LRR 2 83..104
leucine-rich repeat 84..107 CDD:275380
LRR_RI 103..>261 CDD:238064
LRR 3 107..129
LRR_8 108..167 CDD:290566
leucine-rich repeat 108..132 CDD:275380
LRR 4 132..153
leucine-rich repeat 133..156 CDD:275380
LRR_8 156..215 CDD:290566
LRR 5 156..177
leucine-rich repeat 157..180 CDD:275380
LRR 6 180..201
leucine-rich repeat 181..204 CDD:275380
LRR_8 204..262 CDD:290566
LRR 7 204..225
leucine-rich repeat 205..228 CDD:275380
LRR 8 228..249
leucine-rich repeat 229..252 CDD:275380
TPKR_C2 261..311 CDD:301599
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 286..390
Important for interaction with MAG. /evidence=ECO:0000269|PubMed:19420245 315..327
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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