DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG32055 and Lrig2

DIOPT Version :9

Sequence 1:NP_729599.1 Gene:CG32055 / 39188 FlyBaseID:FBgn0052055 Length:534 Species:Drosophila melanogaster
Sequence 2:NP_001101180.1 Gene:Lrig2 / 310753 RGDID:1309554 Length:1054 Species:Rattus norvegicus


Alignment Length:615 Identity:161/615 - (26%)
Similarity:241/615 - (39%) Gaps:162/615 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 LQVLALLLLSGVFGKDLQECEDLGNGSYLCREIESFEQLNRYVGKNW---------KSVKV-VNE 58
            |..|:...|||....|:... ||.:              ||.  .||         :.||: .||
  Rat    60 LPALSWRALSGPLSPDISSL-DLSH--------------NRL--SNWNISLESETLQEVKMNYNE 107

  Fly    59 HTGIERAEDGELP--GLST--LLQLDLSESGGVTLGEKGLQDFKALQKLNLTHAQLDELKSEQFP 119
            .|        |:|  |..|  :.||.|..:....:..:..|.:.||:.|:|:...:.|:|:..||
  Rat   108 LT--------EIPYFGEPTPNITQLSLVHNLIPEINAEAFQLYSALESLDLSSNIISEIKTSSFP 164

  Fly   120 NPSEMINFDVSYNDILAITTKLMSG-----FGNLVYANFSENLIAVIEPNAFRHMKNLRFLDLTT 179
            ..| :...::|.|.|    |.|.:|     .|:|:....:.|.|::|.|..|: :.:|:||:|..
  Rat   165 RMS-LKYLNLSNNRI----TTLEAGCFDNLSGSLLVVKLNRNRISMIPPKVFK-LPHLQFLELKR 223

  Fly   180 N---YQENITLGENANLRFLSISNNNLRDFQWCHLRVLPKLEELHLHSNWLEHLDMGIFYALPNL 241
            |   ..|.:|.....:||.|.:..|.:...:......|..:|||.|..|.|..:..|..|.|..|
  Rat   224 NRIKIVEGLTFQGLDSLRSLKMQRNGISKLKDGAFFGLNNMEELELEHNNLTGVHKGWLYGLRML 288

  Fly   242 RVLNVSNNNLFEIKRTLFMAPGEIAP--------LELLDYSSNIVKVLDDSVFCRLKKLRTLNLW 298
            :.|.||.|           |..:|:|        |..||.|.|.:..||:|.|..|..|..|||.
  Rat   289 QQLYVSQN-----------AIEKISPDAWEFCQRLSALDLSYNQLTRLDESAFVGLSLLERLNLG 342

  Fly   299 LNQINRIHPRAFLGLSSLQTLHLQGNKISILPDD---VFANLTALEKLDLSKNNIQKLGLRVF-G 359
            .|::..|....|..||:||||.|:.|:||...:|   ||:.|.:|.||.|..|.|:.:..:.| |
  Rat   343 DNRVTHIADGVFRFLSNLQTLDLRNNEISWAIEDASEVFSGLKSLTKLILQGNRIKSVTQKAFVG 407

  Fly   360 ERILRKLIYLDLSNNYIADLHPLALSSMPFIKELRLRRNRL------------------------ 400
               |..|.||||:||.|..:...|. |...:|||.|..:.|                        
  Rat   408 ---LESLEYLDLNNNAIMSIQENAF-SQTHLKELVLNTSSLLCDCHLKWLLQWLVDNNFHHSVNV 468

  Fly   401 -------------VSLDLRMFA------------PLRQLQLLTIN--------------ENRLEE 426
                         :::||:.|.            |...:.|..:|              .:.|..
  Rat   469 SCAHPEWLAGQSILNVDLKDFVCDDFLKPQIRTHPENTVALRGVNVTLMCTAVSSSDSPMSTLWR 533

  Fly   427 IDGEILDTLDRLNHLELNNNRLTFLPDLKSSQNLLQLR----NITLEGNPWQCLCLDEITSWLNG 487
            .|.|||..:|..|.:.....      |.::.:....||    |.|.||. :||:..:...|    
  Rat   534 KDSEILYDVDIENFVRYRQQ------DGEALEYTSVLRLFSVNFTDEGK-YQCIVTNHFGS---- 587

  Fly   488 RHVSYARPSSAYFSGRKPLCVVTPMDKCLR 517
               :|::.:....: ..|..:.||||..:|
  Rat   588 ---NYSQKAKLTVN-EMPSFLKTPMDLTIR 613

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG32055NP_729599.1 leucine-rich repeat 76..99 CDD:275380 4/22 (18%)
leucine-rich repeat 100..123 CDD:275380 7/22 (32%)
LRR_8 128..180 CDD:290566 17/56 (30%)
leucine-rich repeat 128..147 CDD:275380 6/23 (26%)
leucine-rich repeat 148..171 CDD:275380 6/22 (27%)
leucine-rich repeat 172..192 CDD:275380 7/22 (32%)
LRR_RI <187..400 CDD:238064 76/224 (34%)
LRR_8 192..251 CDD:290566 19/58 (33%)
leucine-rich repeat 193..216 CDD:275380 5/22 (23%)
leucine-rich repeat 217..240 CDD:275380 9/22 (41%)
leucine-rich repeat 241..267 CDD:275380 7/25 (28%)
leucine-rich repeat 268..291 CDD:275380 10/22 (45%)
LRR_8 290..350 CDD:290566 26/62 (42%)
leucine-rich repeat 292..315 CDD:275380 8/22 (36%)
leucine-rich repeat 316..339 CDD:275380 12/25 (48%)
LRR_8 340..400 CDD:290566 23/60 (38%)
leucine-rich repeat 340..365 CDD:275380 9/25 (36%)
leucine-rich repeat 366..389 CDD:275380 10/22 (45%)
leucine-rich repeat 390..413 CDD:275380 9/71 (13%)
LRR_8 391..448 CDD:290566 18/119 (15%)
leucine-rich repeat 414..437 CDD:275380 7/36 (19%)
Lrig2NP_001101180.1 LRR_RI <50..204 CDD:238064 43/173 (25%)
leucine-rich repeat 98..120 CDD:275380 9/29 (31%)
LRR_8 119..178 CDD:290566 15/59 (25%)
leucine-rich repeat 121..144 CDD:275380 4/22 (18%)
LRR_RI 136..398 CDD:238064 88/278 (32%)
leucine-rich repeat 145..167 CDD:275380 7/21 (33%)
LRR_8 167..226 CDD:290566 19/64 (30%)
leucine-rich repeat 168..192 CDD:275380 6/27 (22%)
leucine-rich repeat 193..215 CDD:275380 6/22 (27%)
leucine-rich repeat 216..239 CDD:275380 7/22 (32%)
LRR_8 239..298 CDD:290566 19/69 (28%)
leucine-rich repeat 240..263 CDD:275380 5/22 (23%)
leucine-rich repeat 264..287 CDD:275380 9/22 (41%)
leucine-rich repeat 288..311 CDD:275380 8/33 (24%)
LRR_8 311..370 CDD:290566 25/58 (43%)
leucine-rich repeat 312..335 CDD:275380 10/22 (45%)
leucine-rich repeat 336..359 CDD:275380 8/22 (36%)
LRR_8 358..421 CDD:290566 29/65 (45%)
leucine-rich repeat 360..384 CDD:275380 11/23 (48%)
LRR_4 385..426 CDD:289563 17/43 (40%)
leucine-rich repeat 387..410 CDD:275380 9/25 (36%)
leucine-rich repeat 411..433 CDD:275380 10/22 (45%)
LRRCT 444..492 CDD:214507 4/47 (9%)
Ig 501..597 CDD:299845 21/109 (19%)
IG 503..597 CDD:214652 21/107 (20%)
I-set 601..691 CDD:254352 6/13 (46%)
Ig_1 618..692 CDD:143240
I-set 695..782 CDD:254352
Ig 713..782 CDD:299845
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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