DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG32055 and lron-9

DIOPT Version :9

Sequence 1:NP_729599.1 Gene:CG32055 / 39188 FlyBaseID:FBgn0052055 Length:534 Species:Drosophila melanogaster
Sequence 2:NP_001076615.1 Gene:lron-9 / 172529 WormBaseID:WBGene00011971 Length:653 Species:Caenorhabditis elegans


Alignment Length:544 Identity:138/544 - (25%)
Similarity:210/544 - (38%) Gaps:153/544 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MQALQVLALLLLSGV-FGKDLQECEDLG---NGSYLCREIESFEQLNRYV--------------- 46
            |:.|..:.|:.|..| .|..:..|.||.   |.|.|     |.:.||..:               
 Worm     1 MRPLVAIFLVQLCFVAVGAAIPNCPDLDVLENQSDL-----SQDDLNNLILCFCKPDDKEKVVIS 60

  Fly    47 ---GKNW----------KSVKVVNEHTGIERAE--DGELPGLSTLL----QLDLSESGGVTLGEK 92
               |.|.          |:..::.....|:..|  ||.||....|.    .|::.|..|....:.
 Worm    61 CLYGSNLDHLMKATEAVKNASLITSSISIQHMEFPDGGLPEFGKLAPDLKSLEIKECSGQDELKV 125

  Fly    93 GLQDFKALQKL--NLT-HA------------------------QLDELKSEQFPNPSEMINFDVS 130
            |...||.|::.  ||| ||                        :||.|..:||.|..::     |
 Worm   126 GDDSFKGLEQTLRNLTIHACNLQTIPPSVDSLENLETVVFSNNKLDSLGVDQFKNKKQL-----S 185

  Fly   131 YNDILAITTKLMSGFGNLVYANFSENLIAVIEPNAFRHMKNLRFLDLTTNYQENITLGENANLRF 195
            |.|:                   |.|.|..||..||..:.:|          |.:.:||:     
 Worm   186 YLDV-------------------SGNFITSIEEKAFEPLTSL----------ETLVIGEH----- 216

  Fly   196 LSISNNNLRDFQWCHLRVLPKLEELHLHSNWLEHLDMGIFYALPNLRVLNVSN-NNLFEIKRTLF 259
                                         |::....:.....|..|:.|::|. :.:|:...|||
 Worm   217 -----------------------------NFINETVVEEIGRLKALKTLDLSRADGIFQPPETLF 252

  Fly   260 MAPGEIAPLELLDYSSNIVKVLDDSVFCRLKKLRTLNLWLNQINRIHPRAFLGLSSLQTLHLQGN 324
            .   ||..:|:|..|...:..|:...|..||||:.|:|.:|.|..|...||.||.||..|.|.||
 Worm   253 K---EIPQIEVLKLSGCSIPTLEPGQFATLKKLKELDLRVNLIENITAYAFDGLESLTRLSLAGN 314

  Fly   325 KISILPDDVFANLTALEKLDLSKNNIQKLGLRVFGERILRKLIYLDLSNNYIADLHPLALSSMPF 389
            .||.|..|||..|::||:|||..|.|:.:...|| :.:..||..:.|.||.|::|....|.   .
 Worm   315 FISKLEPDVFFGLSSLEELDLGWNEIKTIPTDVF-KPLTDKLKTISLRNNPISELPSTGLG---M 375

  Fly   390 IKELRLRRNRLVSL---DLRMFAPLRQLQLLTINENRLEEIDGEILDTLDRLNHLELNNNRLTFL 451
            :::|.|......|:   .|:.:..|.:|.|...|.:.:  ::....:..|.|..|.|..|:|..|
 Worm   376 LEKLSLAECGFTSISADQLKDYPKLEELDLSKCNISNI--VENTFENQKDSLKKLNLQKNKLKSL 438

  Fly   452 PDLKSSQNLLQLRNITLEGNPWQC 475
            |:|  .:||..:.::.:..||::|
 Worm   439 PNL--IKNLPAIESLDVSSNPYRC 460

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG32055NP_729599.1 leucine-rich repeat 76..99 CDD:275380 6/26 (23%)
leucine-rich repeat 100..123 CDD:275380 12/49 (24%)
LRR_8 128..180 CDD:290566 11/51 (22%)
leucine-rich repeat 128..147 CDD:275380 3/18 (17%)
leucine-rich repeat 148..171 CDD:275380 7/22 (32%)
leucine-rich repeat 172..192 CDD:275380 4/19 (21%)
LRR_RI <187..400 CDD:238064 63/213 (30%)
LRR_8 192..251 CDD:290566 5/59 (8%)
leucine-rich repeat 193..216 CDD:275380 0/22 (0%)
leucine-rich repeat 217..240 CDD:275380 2/22 (9%)
leucine-rich repeat 241..267 CDD:275380 9/26 (35%)
leucine-rich repeat 268..291 CDD:275380 6/22 (27%)
LRR_8 290..350 CDD:290566 31/59 (53%)
leucine-rich repeat 292..315 CDD:275380 10/22 (45%)
leucine-rich repeat 316..339 CDD:275380 12/22 (55%)
LRR_8 340..400 CDD:290566 19/59 (32%)
leucine-rich repeat 340..365 CDD:275380 9/24 (38%)
leucine-rich repeat 366..389 CDD:275380 7/22 (32%)
leucine-rich repeat 390..413 CDD:275380 5/25 (20%)
LRR_8 391..448 CDD:290566 13/59 (22%)
leucine-rich repeat 414..437 CDD:275380 3/22 (14%)
lron-9NP_001076615.1 leucine-rich repeat 137..159 CDD:275380 5/21 (24%)
LRR_8 159..217 CDD:290566 20/125 (16%)
leucine-rich repeat 160..183 CDD:275380 6/22 (27%)
leucine-rich repeat 184..207 CDD:275380 10/46 (22%)
leucine-rich repeat 208..232 CDD:275380 6/67 (9%)
LRR_8 233..292 CDD:290566 21/61 (34%)
leucine-rich repeat 233..257 CDD:275380 9/26 (35%)
LRR_RI 234..456 CDD:238064 75/232 (32%)
leucine-rich repeat 258..281 CDD:275380 6/22 (27%)
LRR_8 280..340 CDD:290566 31/59 (53%)
leucine-rich repeat 282..305 CDD:275380 10/22 (45%)
leucine-rich repeat 306..329 CDD:275380 12/22 (55%)
LRR_8 328..410 CDD:290566 24/85 (28%)
leucine-rich repeat 330..375 CDD:275380 17/48 (35%)
leucine-rich repeat 376..399 CDD:275380 4/22 (18%)
LRR_8 398..457 CDD:290566 15/62 (24%)
leucine-rich repeat 400..420 CDD:275380 4/21 (19%)
leucine-rich repeat 425..447 CDD:275380 10/23 (43%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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