DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG32055 and omd

DIOPT Version :10

Sequence 1:NP_729599.1 Gene:CG32055 / 39188 FlyBaseID:FBgn0052055 Length:534 Species:Drosophila melanogaster
Sequence 2:XP_012817254.1 Gene:omd / 105947037 XenbaseID:XB-GENE-960655 Length:413 Species:Xenopus tropicalis


Alignment Length:441 Identity:106/441 - (24%)
Similarity:163/441 - (36%) Gaps:134/441 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   111 DELKSEQFPN-PSEMINFDVSYNDILAITTKLMSGFGNLVYANFSENLIA--VIEPNAFRHMKNL 172
            |..|.:..|. ||.:.:..:.:|||.|:..|......:|...|.|.|.|.  .||..||..::||
 Frog    78 DNRKLKNIPQIPSRIQHLYLQFNDIEAVMMKSFINATSLKEINLSHNKIKSNKIEVGAFAKLRNL 142

  Fly   173 R--FLD------LTTNYQENITLGENANLRFLSISNNNLRDFQWCHLRVLPKLEELHLHSNWLEH 229
            .  |:|      :..:...::   |..|..|..|:..|.||.|                      
 Frog   143 EQIFIDHNDLVEIPPDLPSSV---ERLNFAFNKIARLNDRDLQ---------------------- 182

  Fly   230 LDMGIFYALPNLRVLNVSNNNLFEIK-RTLFMAPGEIAPLELLDYSSNIVKVLDDSVFCRLKKLR 293
                   .|..|.:|::.||::..:| :||                         :...||.:|.
 Frog   183 -------GLVKLTMLDLCNNHIDSVKSKTL-------------------------NKLARLMQLN 215

  Fly   294 TLNLWLNQINRIHPRAFLGLSSLQTLHLQGNKISILPDDVFANLTALEKLDLSKNNIQKLGLRVF 358
            ..|      |::|.......:||..|.::.|.||.:|||.|..|..|..:.:|.||::::..::|
 Frog   216 MCN------NKLHSMPASLPTSLMYLSIENNSISNIPDDYFTKLPNLLAIRMSHNNLEEIPTKIF 274

  Fly   359 GERILRKLIYLDLSNNYIADLHPLALSSMPFIKELRLRRNRLVSLDLRMFAPLRQLQLLTINENR 423
                                       ::|.:.||.|..|:   |....|.| |.||.|.|.:|.
 Frog   275 ---------------------------NLPNLVELNLGHNK---LQQAFFIP-RSLQHLYIQDNE 308

  Fly   424 LEEIDGEILDTLDRLNHLELNNNRLTFLPDLKSSQNLLQLRNITLEGNPWQCLCLDEITSWLNGR 488
            ||.::..|:  ..:::|  .|.|.||:   |:..||.||....||     ..||..      |.:
 Frog   309 LESLNMTIM--CPKIDH--FNTNHLTY---LRVDQNKLQAPISTL-----AYLCFP------NMQ 355

  Fly   489 HVSYARPSSAYFSGRKPLCVVTPM---DKCLRDLQETKAQGIV----ESYE 532
            .:.|.  ...|..|..|. |..||   .....:.:|.:.:||.    |.||
 Frog   356 RIYYG--EQKYAEGEIPK-VQEPMLTHPTVSEEEEEDEREGIADYRHEEYE 403

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG32055NP_729599.1 leucine-rich repeat 76..99 CDD:275380
leucine-rich repeat 100..123 CDD:275380 4/12 (33%)
LRR_8 126..180 CDD:404697 18/63 (29%)
leucine-rich repeat 128..147 CDD:275380 5/18 (28%)
leucine-rich repeat 148..171 CDD:275380 9/24 (38%)
LRR 171..>486 CDD:443914 73/323 (23%)
leucine-rich repeat 172..192 CDD:275380 4/27 (15%)
leucine-rich repeat 193..216 CDD:275380 6/22 (27%)
leucine-rich repeat 217..240 CDD:275380 1/22 (5%)
leucine-rich repeat 241..267 CDD:275380 7/26 (27%)
leucine-rich repeat 268..291 CDD:275380 2/22 (9%)
leucine-rich repeat 292..315 CDD:275380 4/22 (18%)
leucine-rich repeat 316..339 CDD:275380 10/22 (45%)
leucine-rich repeat 340..365 CDD:275380 5/24 (21%)
leucine-rich repeat 366..389 CDD:275380 0/22 (0%)
leucine-rich repeat 390..413 CDD:275380 7/22 (32%)
leucine-rich repeat 414..437 CDD:275380 8/22 (36%)
omdXP_012817254.1 LRRNT 60..94 CDD:214470 5/15 (33%)
leucine-rich repeat 72..91 CDD:275380 4/12 (33%)
LRR <90..>289 CDD:443914 62/291 (21%)
leucine-rich repeat 92..115 CDD:275380 5/22 (23%)
leucine-rich repeat 116..141 CDD:275380 9/24 (38%)
leucine-rich repeat 142..162 CDD:275380 3/19 (16%)
leucine-rich repeat 163..186 CDD:275380 9/54 (17%)
leucine-rich repeat 187..210 CDD:275380 7/47 (15%)
leucine-rich repeat 211..231 CDD:275380 5/25 (20%)
leucine-rich repeat 232..255 CDD:275380 10/22 (45%)
leucine-rich repeat 256..278 CDD:275380 5/48 (10%)
leucine-rich repeat 279..302 CDD:275380 10/26 (38%)
leucine-rich repeat 303..328 CDD:275380 7/28 (25%)
Blue background indicates that the domain is not in the aligned region.

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