DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6628 and AT1G50060

DIOPT Version :9

Sequence 1:NP_648386.1 Gene:CG6628 / 39183 FlyBaseID:FBgn0036072 Length:277 Species:Drosophila melanogaster
Sequence 2:NP_175428.1 Gene:AT1G50060 / 841430 AraportID:AT1G50060 Length:161 Species:Arabidopsis thaliana


Alignment Length:242 Identity:47/242 - (19%)
Similarity:72/242 - (29%) Gaps:105/242 - (43%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 VALMLFGFLQVAFSQDNATAPPTDYCQSGLCPSLKKHIACKNKGELGKQCSPDAHLVNLTGLQDL 71
            :.::...||.||   .||...|.||                                        
plant     9 LVIVAISFLVVA---TNAQNTPQDY---------------------------------------- 30

  Fly    72 ILGEHNALRNVLASGKIINLPKPDRMATLQWHSELADLATLNVK-----QCVLQHDSCHNTPDFH 131
             |..||..|..:....::            |.:.||..| ||..     .|.|.|.   |.|   
plant    31 -LNSHNTARAQVGVPNVV------------WDTTLAAYA-LNYSNFRKADCNLVHS---NGP--- 75

  Fly   132 NSGQNLA--------LVNITLLPEDGNHTDECLVKESIGGWWNQSINITKEQLQRFPKGKLGDSI 188
             .|:|||        .::...|..|.............||  .|.::.|:               
plant    76 -YGENLAKGSSSSFSAISAVKLWVDEKPYYSYAYNNCTGG--KQCLHYTQ--------------- 122

  Fly   189 RNFAVMARDNNTHVGCAALRFEKPAGHPLFLLACNYAS--NYVPDWP 233
                |:.|| :..:|||.::    ..:..:.::|||.|  |:|.::|
plant   123 ----VVWRD-SVKIGCARVQ----CTNTWWFVSCNYNSPGNWVGEYP 160

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6628NP_648386.1 SCP_euk 69..225 CDD:240180 33/168 (20%)
AT1G50060NP_175428.1 CAP_PR-1 27..161 CDD:349400 41/221 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG2340
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1528782at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.910

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