DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6628 and AT1G50050

DIOPT Version :9

Sequence 1:NP_648386.1 Gene:CG6628 / 39183 FlyBaseID:FBgn0036072 Length:277 Species:Drosophila melanogaster
Sequence 2:NP_175427.1 Gene:AT1G50050 / 841429 AraportID:AT1G50050 Length:226 Species:Arabidopsis thaliana


Alignment Length:166 Identity:36/166 - (21%)
Similarity:57/166 - (34%) Gaps:42/166 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    64 NLTGLQDLILGEHNALRNVLASGKIINLPKPDRMATLQWHSELADLAT--LNVKQCVLQHDSCHN 126
            |....|...|..||..|..:.            :|.:.|.:.:|..||  .|.::.     .|..
plant    22 NAQNAQQDYLNTHNTARAQVG------------VANVVWDTVVAAYATNYANARKV-----DCSL 69

  Fly   127 TPDFHNS-GQNLALVNITLLPEDGNHTDECLVKESIGGWWNQSIN--ITKEQLQRFPKGKLGDSI 188
            ||....| |:|||..|..|.  .|.......|.|.  .::|.:.|  |..:|            .
plant    70 TPSTGGSYGENLANGNNALF--TGVAAVNLWVNEK--PYYNYTANACIGAQQ------------C 118

  Fly   189 RNFAVMARDNNTHVGCAALRFEKPAGHPLFLLACNY 224
            :::..:...|:..:|||.:......    :.:.|||
plant   119 KHYTQVVWSNSVKIGCARVLCNNGG----YFVGCNY 150

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6628NP_648386.1 SCP_euk 69..225 CDD:240180 35/161 (22%)
AT1G50050NP_175427.1 SCP 27..151 CDD:294090 35/161 (22%)
Radical_SAM <155..185 CDD:302752
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG2340
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1528782at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.910

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