DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6628 and AT1G50050

DIOPT Version :10

Sequence 1:NP_648386.1 Gene:CG6628 / 39183 FlyBaseID:FBgn0036072 Length:277 Species:Drosophila melanogaster
Sequence 2:NP_175427.1 Gene:AT1G50050 / 841429 AraportID:AT1G50050 Length:226 Species:Arabidopsis thaliana


Alignment Length:166 Identity:36/166 - (21%)
Similarity:57/166 - (34%) Gaps:42/166 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    64 NLTGLQDLILGEHNALRNVLASGKIINLPKPDRMATLQWHSELADLAT--LNVKQCVLQHDSCHN 126
            |....|...|..||..|..:.            :|.:.|.:.:|..||  .|.::.     .|..
plant    22 NAQNAQQDYLNTHNTARAQVG------------VANVVWDTVVAAYATNYANARKV-----DCSL 69

  Fly   127 TPDFHNS-GQNLALVNITLLPEDGNHTDECLVKESIGGWWNQSIN--ITKEQLQRFPKGKLGDSI 188
            ||....| |:|||..|..|.  .|.......|.|.  .::|.:.|  |..:|            .
plant    70 TPSTGGSYGENLANGNNALF--TGVAAVNLWVNEK--PYYNYTANACIGAQQ------------C 118

  Fly   189 RNFAVMARDNNTHVGCAALRFEKPAGHPLFLLACNY 224
            :::..:...|:..:|||.:......    :.:.|||
plant   119 KHYTQVVWSNSVKIGCARVLCNNGG----YFVGCNY 150

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6628NP_648386.1 CAP_euk 69..225 CDD:349399 35/161 (22%)
AT1G50050NP_175427.1 CAP_PR-1 27..151 CDD:349400 35/161 (22%)
RlmN <156..183 CDD:440582
Blue background indicates that the domain is not in the aligned region.

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