DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG6628 and F09B9.5

DIOPT Version :10

Sequence 1:NP_648386.1 Gene:CG6628 / 39183 FlyBaseID:FBgn0036072 Length:277 Species:Drosophila melanogaster
Sequence 2:NP_001024544.1 Gene:F09B9.5 / 259721 WormBaseID:WBGene00008604 Length:184 Species:Caenorhabditis elegans


Alignment Length:144 Identity:33/144 - (22%)
Similarity:52/144 - (36%) Gaps:39/144 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    70 DLILGEHNALRNVLASGKIINLPKPDRMATL--QWHSELADLATLNVKQCVLQHDSCHNTPDFHN 132
            |.:|.|||..|.:.::.   ||...:.::.:  ||..:||..|                    |.
 Worm    12 DQMLLEHNTRRKMHSAP---NLECSEELSEMAQQWADKLAKQA--------------------HI 53

  Fly   133 SGQNLALV--NITLLPEDGNHTDECLVKESIGGWWNQSINITKEQLQ-RFPKGKLGDSIRNFAVM 194
            |...|:.:  |||..|.|       :..||:...|.|.    .|:.: ..|..:.|.:.....:.
 Worm    54 SFSELSGIGENITFFPPD-------IDAESVVEHWYQE----HEKYEYETPGWQTGTNYFTQVIW 107

  Fly   195 ARDNNTHVGCAALR 208
            .......||||.:|
 Worm   108 RSTKEIGVGCAYVR 121

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6628NP_648386.1 CAP_euk 69..225 CDD:349399 33/144 (23%)
F09B9.5NP_001024544.1 CAP_GAPR1-like 9..168 CDD:349401 33/144 (23%)

Return to query results.
Submit another query.