DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6628 and scl-20

DIOPT Version :9

Sequence 1:NP_648386.1 Gene:CG6628 / 39183 FlyBaseID:FBgn0036072 Length:277 Species:Drosophila melanogaster
Sequence 2:NP_507655.1 Gene:scl-20 / 191309 WormBaseID:WBGene00013972 Length:212 Species:Caenorhabditis elegans


Alignment Length:192 Identity:49/192 - (25%)
Similarity:69/192 - (35%) Gaps:54/192 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    72 ILGEHNALRNVLASGKII--NLPKPDR--MATLQWHSELADLATLNVKQCVLQHDSCHNTPDFHN 132
            |:..||:||:.||:|..:  .:|||..  |..::|...||.:|..|...|          |....
 Worm    28 IVDFHNSLRSQLANGDYVVDGVPKPPAKDMMKMKWDPILAGMAKNNAATC----------PSLFT 82

  Fly   133 SGQNLA------LVNITLLPEDGNHTDECL--VKE-----SIGGWWNQSINITKEQLQRFPKGKL 184
            ..:.|.      |.|:|    .|:.....|  ||:     ...||.||...:            .
 Worm    83 DSKMLGRNYYHRLANVT----SGSLDKYALFAVKKWERQFQERGWKNQEFRM------------F 131

  Fly   185 GDS--IRNFAVMARDNNTHVGCAALRFEKPAGHPLF------LLACNYAS-NYVPDWPIYKE 237
            ||.  :.:...|......||||.....:  |...||      ::.|.|.| ..:...|||||
 Worm   132 GDHRLLTSATQMVWATTRHVGCGVNICD--AEKNLFGYRNKVVVICEYQSKGNIHGLPIYKE 191

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6628NP_648386.1 SCP_euk 69..225 CDD:240180 42/177 (24%)
scl-20NP_507655.1 SCP 23..177 CDD:214553 42/176 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 41 1.000 Domainoid score I8510
eggNOG 1 0.900 - - E1_COG2340
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 71 1.000 Inparanoid score I3895
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1528782at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10334
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
65.970

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