DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6628 and scl-19

DIOPT Version :9

Sequence 1:NP_648386.1 Gene:CG6628 / 39183 FlyBaseID:FBgn0036072 Length:277 Species:Drosophila melanogaster
Sequence 2:NP_507654.2 Gene:scl-19 / 191308 WormBaseID:WBGene00013971 Length:207 Species:Caenorhabditis elegans


Alignment Length:204 Identity:51/204 - (25%)
Similarity:70/204 - (34%) Gaps:62/204 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    55 QCSPDAHLVNLTGLQDLILGEHNALRNVLASGKII---NLPKPDR-MATLQWHSELADLATLNVK 115
            |.||:       |.|. :|..||.||:.:|.|...   .:..|.| |..|.:..:...||...|.
 Worm    17 QLSPN-------GRQQ-VLDFHNKLRSQVALGVFSANGTIKPPARNMERLTYGQQFERLAQDYVA 73

  Fly   116 QCVLQHDSCHNTPD------FHNSGQNLALVNITLLPEDGNHTDECLV--------KESIGGWWN 166
            .|          ||      ..|.|.|   ...|.:.|..|..||.::        :..:.||.:
 Worm    74 DC----------PDGLEIPIGRNIGMN---YYTTKVDETYNSMDEYVIDALNDWAEEFQVNGWLS 125

  Fly   167 QSINITKEQLQRFPKGKLGDSIRNFAVMARDNNTHVGCAALRFEKPAGHPL-FLLACNY--ASNY 228
            ...|.|              ||...:.|......:|||...|.:     |: .::.|.|  ..|.
 Worm   126 TIYNDT--------------SISAASQMVWAGTKYVGCGVKRCD-----PINVVVVCMYYQQGNL 171

  Fly   229 VPDWPIYKE 237
            | ..|||||
 Worm   172 V-GRPIYKE 179

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6628NP_648386.1 SCP_euk 69..225 CDD:240180 40/176 (23%)
scl-19NP_507654.2 SCP 21..167 CDD:214553 41/185 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 41 1.000 Domainoid score I8510
eggNOG 1 0.900 - - E1_COG2340
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 71 1.000 Inparanoid score I3895
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1528782at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10334
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
65.970

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