DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG6628 and scl-6

DIOPT Version :9

Sequence 1:NP_648386.1 Gene:CG6628 / 39183 FlyBaseID:FBgn0036072 Length:277 Species:Drosophila melanogaster
Sequence 2:NP_502508.1 Gene:scl-6 / 183343 WormBaseID:WBGene00008028 Length:209 Species:Caenorhabditis elegans


Alignment Length:189 Identity:50/189 - (26%)
Similarity:68/189 - (35%) Gaps:31/189 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    59 DAHLVNLTGLQDLILGEHNALRNVLASGKI-IN---LPKPDRMATLQWHSELADLATLNVKQCVL 119
            ||...:.|  |..|:..||:.|:.||:|.. ||   .|....:..:.|.|.||..|......|..
 Worm    17 DAEFSSST--QQFIVDLHNSFRSKLATGTYSINGTLKPAGSNIRKMSWDSTLATSAQTYANTCPT 79

  Fly   120 QHDSCHNTPDFHNSGQNL----ALVNITLLPEDGNHTDECLVKE-SIGGWWNQSINITKEQLQRF 179
            ...:...|      |:||    ...||:.|...|........:| ...||   :.|...::|  |
 Worm    80 GFSNTQGT------GENLYWRTTSANISGLDIYGGAASVSWEQEFQKYGW---ATNYFSQEL--F 133

  Fly   180 PKGKLGDSIRNFAVMARDNNTHVGCAALRFEKPA-GHPLFLLACNY--ASNYVPDWPIY 235
            ..|     :.|...||......|||......|.: |.....:.|:|  ...|| |..||
 Worm   134 DTG-----VGNGTQMAWAKTNLVGCGVKNCGKDSTGLNKVAVVCHYKPLGRYV-DQMIY 186

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6628NP_648386.1 SCP_euk 69..225 CDD:240180 42/167 (25%)
scl-6NP_502508.1 SCP 23..176 CDD:214553 43/170 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 41 1.000 Domainoid score I8510
eggNOG 1 0.900 - - E1_COG2340
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 71 1.000 Inparanoid score I3895
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1528782at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10334
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
65.970

Return to query results.
Submit another query.