DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6628 and scl-5

DIOPT Version :9

Sequence 1:NP_648386.1 Gene:CG6628 / 39183 FlyBaseID:FBgn0036072 Length:277 Species:Drosophila melanogaster
Sequence 2:NP_502506.1 Gene:scl-5 / 178253 WormBaseID:WBGene00008027 Length:208 Species:Caenorhabditis elegans


Alignment Length:202 Identity:46/202 - (22%)
Similarity:69/202 - (34%) Gaps:37/202 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    69 QDLILGEHNALRNVLASGKII----NLPKPDRMATLQWHSELADLATLNVKQCVLQHDSCHNTPD 129
            |..||..||.||:.:|.|..:    ..|....|..::|.:.:|..|.....:|...|......  
 Worm    24 QAAILNVHNTLRSRIAKGTYVAKGTAKPAASDMLKMKWDATVAASAQAYANKCPTGHSGAAGL-- 86

  Fly   130 FHNSGQNL----ALVNITLLPEDGNHTDECLVKE-SIGGWWNQSINITKEQLQRFPKGKLGDSIR 189
                |:||    ....||.:.:.|........|| ...||.:.:::     :..|..|     |.
 Worm    87 ----GENLYWYWTSATITNIDQFGATGSAAWEKEFQDYGWSSNTLS-----MSLFNTG-----IG 137

  Fly   190 NFAVMARDNNTHVGCAALRFEKPA-GHPLFLLACNY--ASNYVPDWPIYKE--KAIGCQSGSDLK 249
            :...||......:||......|.. |.....:.|.|  ..||: :..||..  ....|.||:.  
 Worm   138 HATQMAWAKTNLIGCGVKNCGKDTNGFNKVTVVCQYKPQGNYL-NQNIYTSGTTCSKCPSGTS-- 199

  Fly   250 YPSLCKA 256
                |:|
 Worm   200 ----CEA 202

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6628NP_648386.1 SCP_euk 69..225 CDD:240180 37/167 (22%)
scl-5NP_502506.1 SCP 22..175 CDD:214553 37/166 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 41 1.000 Domainoid score I8510
eggNOG 1 0.900 - - E1_COG2340
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 71 1.000 Inparanoid score I3895
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1528782at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10334
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
65.970

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