DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6628 and Crispld2

DIOPT Version :10

Sequence 1:NP_648386.1 Gene:CG6628 / 39183 FlyBaseID:FBgn0036072 Length:277 Species:Drosophila melanogaster
Sequence 2:NP_612527.2 Gene:Crispld2 / 171547 RGDID:620860 Length:497 Species:Rattus norvegicus


Alignment Length:210 Identity:46/210 - (21%)
Similarity:72/210 - (34%) Gaps:49/210 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    72 ILGEHNALRNVLASGKIINLPKPDRMATLQWHSELADLATLNVKQCVLQHDSCHNTPDFHNSGQN 136
            ||..||.||     |::  .|....|..:.|..||...|....::|:.:|.........   |||
  Rat    59 ILMLHNKLR-----GQV--YPPASNMEYMTWDEELERSAAAWAQRCLWEHGPASLLVSI---GQN 113

  Fly   137 LALVNITLLPEDGNHTDECLVKESIGGWWNQSINIT----KEQLQRFPKGKLGDSIRNFAVMARD 197
            || |:.......|.|         :..|:::..:.|    .|.....|:...|....::..|...
  Rat   114 LA-VHWGRYRSPGFH---------VQSWYDEVKDYTYPYPHECNPWCPERCSGAMCTHYTQMVWA 168

  Fly   198 NNTHVGCA-----ALRFEKPAGHPLFLLACNYA--SNYVPDWPIYK----------EKAIGCQSG 245
            ....:|||     ::............|.|||:  .|::.:.| ||          ....||:: 
  Rat   169 TTNKIGCAVHTCRSMSVWGDIWENAVYLVCNYSPKGNWIGEAP-YKHGRPCSECPSSYGGGCRN- 231

  Fly   246 SDLKYPSLCKAGEEY 260
                  :||...|.|
  Rat   232 ------NLCYREEHY 240

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6628NP_648386.1 CAP_euk 69..225 CDD:349399 35/161 (22%)
Crispld2NP_612527.2 CAP 56..201 CDD:412178 35/161 (22%)
LCCL 286..370 CDD:128866
LCCL 389..488 CDD:427521
Blue background indicates that the domain is not in the aligned region.

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