DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6628 and glipr1a

DIOPT Version :10

Sequence 1:NP_648386.1 Gene:CG6628 / 39183 FlyBaseID:FBgn0036072 Length:277 Species:Drosophila melanogaster
Sequence 2:XP_017210734.1 Gene:glipr1a / 108179203 ZFINID:ZDB-GENE-110309-2 Length:269 Species:Danio rerio


Alignment Length:203 Identity:47/203 - (23%)
Similarity:74/203 - (36%) Gaps:41/203 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    70 DLILGEHNALRNVLASGKIINLPKPDRMATLQWHSELADLATLNVKQCVLQHD-------SCHNT 127
            |..:.|||..|:.::       |....|..:.|.:.||..|....:.|:.:|:       ..|  
Zfish    33 DECVREHNQNRSSVS-------PTAANMRYMTWDAALAVTARAWARFCLFKHNIHLREAKRVH-- 88

  Fly   128 PDFHNSGQNLALVNITLLPEDGNHTDECLVKESIGGWWNQSINITKEQLQRFPKGKLGDSIRNFA 192
            |.|...|:|:..         |.......||.::..|.|:..:......|...|...|    ::.
Zfish    89 PTFTTVGENIWA---------GAPYSRFTVKSAVFSWVNELKDYNYNNNQCNDKKVCG----HYT 140

  Fly   193 VMARDNNTHVGCAALRFEKPAGHPLF------LLACNYAS--NYVPDWPIYKEKA--IGCQSGSD 247
            .:...::..||||............|      :..||||:  |:....| ||:.|  .|| .|||
Zfish   141 QVVWADSYKVGCAVQTCPNGVAETHFSNIQGVIFVCNYATAGNFAGRSP-YKQGASCSGC-GGSD 203

  Fly   248 LKYPSLCK 255
            ....:||:
Zfish   204 KCERNLCR 211

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6628NP_648386.1 CAP_euk 69..225 CDD:349399 33/167 (20%)
glipr1aXP_017210734.1 CAP_GLIPR1-like 30..182 CDD:349404 35/170 (21%)

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