DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG6628 and LOC101883528

DIOPT Version :9

Sequence 1:NP_648386.1 Gene:CG6628 / 39183 FlyBaseID:FBgn0036072 Length:277 Species:Drosophila melanogaster
Sequence 2:XP_005162473.1 Gene:LOC101883528 / 101883528 -ID:- Length:261 Species:Danio rerio


Alignment Length:221 Identity:47/221 - (21%)
Similarity:80/221 - (36%) Gaps:69/221 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    50 GELGKQCSPDAHLVNLTGLQDLILGEHNALRNVLASGKIINLPKPDRMATLQWHSELADLATLNV 114
            |:|.:|     .::|:..|       ||.||:.:.       |....|..:.|...:..:|....
Zfish    21 GQLTEQ-----EILNIVDL-------HNELRSQVQ-------PSAAFMQKVVWDETIRLVAEGYA 66

  Fly   115 KQCVLQHDSCHNTPDFHN--SGQNLAL----VNITLLPEDGNHTDECLVKESIGGWWNQSINITK 173
            .:|:..|:     ||..:  .|:||.:    .|.|               :::..|:|::::...
Zfish    67 AKCIWDHN-----PDLEHLTMGENLFVGTGPFNAT---------------KAVMDWFNENLDYNY 111

  Fly   174 EQLQRFPKGKLGDSIRNFAVMARDNNTHVGCAA--------LRFEKPAGHPLFLLACNYASNYVP 230
            ...........|    ::..:...|.|.:|||:        |.|||..     ||.|    :|.|
Zfish   112 NTNDCAEDKMCG----HYTQLVWANTTKIGCASYFCDTLEKLHFEKAT-----LLIC----DYYP 163

  Fly   231 DWPIYKEKAIGCQSG-SDLKYPSLCK 255
            ...|..:|..  :|| |..|.|..|:
Zfish   164 QGNIEGQKPY--ESGESCSKCPEECE 187

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6628NP_648386.1 SCP_euk 69..225 CDD:240180 32/169 (19%)
LOC101883528XP_005162473.1 SCP_HrTT-1 28..162 CDD:240186 34/180 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1528782at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.010

Return to query results.
Submit another query.