DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6628 and crispld1

DIOPT Version :9

Sequence 1:NP_648386.1 Gene:CG6628 / 39183 FlyBaseID:FBgn0036072 Length:277 Species:Drosophila melanogaster
Sequence 2:XP_002937123.2 Gene:crispld1 / 100490431 XenbaseID:XB-GENE-989389 Length:514 Species:Xenopus tropicalis


Alignment Length:234 Identity:51/234 - (21%)
Similarity:76/234 - (32%) Gaps:71/234 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    71 LILGEHNALRNVLASGKIINLPKPDRMATLQWHSELADLATLNVKQCVLQHDSCHNTPDFHNSGQ 135
            |||..||.||     |::  .|....|..:.|..||...|....:.|:.:|......|..   ||
 Frog    64 LILDLHNKLR-----GEV--YPPASNMEFMIWDVELERSAEAWAETCLWEHGPADLLPVI---GQ 118

  Fly   136 NLALVNITLLPEDGNHTDECLVKE-SIGGWWNQSINITKEQLQRFPKGK----------LGDSIR 189
            ||           |.|........ .:..|:::..:.|      ||..:          .|....
 Frog   119 NL-----------GAHWGRYRPPTYHVQAWYDEVRDYT------FPYPQECDPYCPFRCSGPVCT 166

  Fly   190 NFAVMARDNNTHVGCAA-----LRFEKPAGHPLFLLACNYASNYVPDW----------------P 233
            ::..:....::.:|||.     :............|.|||:..  .:|                |
 Frog   167 HYTQLVWATSSRIGCAINLCHNMNVWGQIWPKAIYLVCNYSPK--GNWWGHAPYKHGHPCSACPP 229

  Fly   234 IYKEKAIGC------QSGSDLKYPSLCKAGEEYQDLIGQ 266
            .|   ..||      :.||||.|| |.:..||..::.||
 Frog   230 SY---GGGCKDNLCYKDGSDLHYP-LPEPEEETNEIEGQ 264

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6628NP_648386.1 SCP_euk 69..225 CDD:240180 34/169 (20%)
crispld1XP_002937123.2 CAP_CRISPLD1 62..207 CDD:349407 34/169 (20%)
LCCL 304..388 CDD:128866
LCCL 407..506 CDD:367672
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1528782at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10334
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
33.020

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