DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG8072 and Pi16

DIOPT Version :9

Sequence 1:NP_648384.1 Gene:CG8072 / 39181 FlyBaseID:FBgn0036070 Length:247 Species:Drosophila melanogaster
Sequence 2:NP_076223.3 Gene:Pi16 / 74116 MGIID:1921366 Length:498 Species:Mus musculus


Alignment Length:214 Identity:50/214 - (23%)
Similarity:84/214 - (39%) Gaps:77/214 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    61 REYLLGLHNGYRQEVASNLFVDLPPAQKMPELVWDNYLSVVAEYHLKRC---------------- 109
            ::.::.|||.||.:|:       |||..|.::.||:.|:..|:.:.::|                
Mouse    35 KQTMVDLHNQYRAQVS-------PPASDMLQMRWDDELAAFAKAYAQKCVWGHNKERGRRGENLF 92

  Fly   110 -----QMDLPDDSCVATDDFSEPHFNYAEDFYPRPVIRQSNVREMTILAEQWLDELYDLDDIATY 169
                 .||:|    :|..::.|.|     ::|        |....|....|..            
Mouse    93 AITDEGMDVP----LAVGNWHEEH-----EYY--------NFSTATCDPNQMC------------ 128

  Fly   170 SAEGEIRNIINDRSSYMGCAAG-----QDYDLWNIHFVLVCYYSSGPPVEGNL-----YEEGIFN 224
               |....::..::..:||.:.     |..:..||| :|||.|.  ||  ||:     |:||. .
Mouse   129 ---GHYTQVVWSKTERIGCGSHFCETLQGVEEANIH-LLVCNYE--PP--GNVKGRKPYQEGT-P 184

  Fly   225 ATLCPNGQSDEYPNLCKTL 243
            .:.||.|.|.| .:||:.:
Mouse   185 CSQCPLGYSCE-NSLCEPM 202

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8072NP_648384.1 SCP_euk 61..208 CDD:240180 35/172 (20%)
Pi16NP_076223.3 SCP_HrTT-1 35..168 CDD:240186 35/172 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 204..277
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 317..407
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 419..467
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG2340
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1528782at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
43.780

Return to query results.
Submit another query.