DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8072 and Glipr1

DIOPT Version :9

Sequence 1:NP_648384.1 Gene:CG8072 / 39181 FlyBaseID:FBgn0036070 Length:247 Species:Drosophila melanogaster
Sequence 2:XP_006514280.1 Gene:Glipr1 / 73690 MGIID:1920940 Length:270 Species:Mus musculus


Alignment Length:231 Identity:48/231 - (20%)
Similarity:74/231 - (32%) Gaps:93/231 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly    54 LVNMAYFREYLLGLHNGYRQEVASNLFVDLPPAQKMPELVWDNYLSVVAEYHLKRCQMDLPDDSC 118
            :.|..:.:| .:.:||..|.:|:       |||:.|..:.||..|:.:|:...|.|         
Mouse    28 ITNEDFIKE-CVQVHNQLRSKVS-------PPARNMLYMSWDPKLAQIAKAWTKSC--------- 75

  Fly   119 VATDDFSEPHFNYAEDFYPRPVIRQSNVREMTILAEQ-----------------WLDEL--YDLD 164
                           :|...|.:........|.|.|.                 |.:|:  ||..
Mouse    76 ---------------EFKHNPQLHSRIHPNFTALGENIWLGSLSIFSVSSAISAWYEEIKHYDFS 125

  Fly   165 DIATYSAEGEIRNIINDRSSYMGCAA-----GQDYDLWNIHFVLVCYYSSGPPVEGNL----YEE 220
            ........|....::...|..:|||.     |.::         :|.|  ||  .||.    |::
Mouse   126 TRKCRHVCGHYTQVVWADSYKLGCAVQLCPNGANF---------ICDY--GP--AGNYPTWPYKQ 177

  Fly   221 GIFNAT-------------LCPNGQSDE----YPNL 239
            |   ||             ||.|.:.|:    |.||
Mouse   178 G---ATCSDCPKDDKCLNSLCINPRRDQVSRMYANL 210

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8072NP_648384.1 SCP_euk 61..208 CDD:240180 31/170 (18%)
Glipr1XP_006514280.1 CAP_GLIPR1-like 32..168 CDD:349404 34/180 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167841312
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1528782at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.850

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