DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment CG8072 and Glipr1l2

DIOPT Version :9

Sequence 1:	NP_648384.1	Gene:	CG8072 / 39181	FlyBaseID:	FBgn0036070	Length:	247	Species:	Drosophila melanogaster
Sequence 2:	NP_080499.1	Gene:	Glipr1l2 / 67537	MGIID:	1914787	Length:	332	Species:	Mus musculus

Alignment Length:	212	Identity:	53/212 - (25%)
Similarity:	73/212 - (34%)	Gaps:	56/212 - (26%)

- Green bases have known domain annotations that are detailed below.

  Fly    59 YFREYLLGLHNGYRQEVASNLFVDLPPAQKMPELVWDNYLSVVAEYHLKRCQMD-------LPDD 116
            :..|| :||||..|..|       .||...:..:.||..||..|....|:|...       |.:.
Mouse    50 FINEY-VGLHNELRGTV-------FPPGVNLRFMTWDVALSRTARAWGKKCMYSRNTHLDKLHES 106

  Fly   117 SCVATDDFSEPHFNYAEDFYPRPVIRQSNVREMTILAEQWLDELYD---LDDIATYSAEGEIRN- 177
            ..|.|:..........|||.....||            .|.:|...   |:|...     |.:|
Mouse   107 HPVFTEIGENMWVGPVEDFTVTTAIR------------SWHEERKSYSYLNDTCV-----EDQNC 154

  Fly   178 -----IINDRSSYMGCA------AGQDYDLWNIHFVL-VCYYSSGPPVEGNLYEEGIFNATLCPN 230
                 ::.|.|..:|||      ||     ...|..| :|.|:.|..:....|:.|.|.:...|.
Mouse   155 SHYIQLVWDSSYKVGCAVTSCARAG-----GFTHAALFICNYAPGGTLTRRPYQAGQFCSRCGPG 214

  Fly   231 GQSDEYPNLCKTLTLND 247
            .|..:|  ||.. |:.|
Mouse   215 DQCTDY--LCSN-TVRD 228

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
CG8072	NP_648384.1	SCP_euk	61..208	CDD:240180	41/169 (24%)
Glipr1l2	NP_080499.1	SCP	49..194	CDD:294090	42/173 (24%)
Glipr1l2	NP_080499.1	Disordered. /evidence=ECO:0000256\|SAM:MobiDB-lite	293..332
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C167841417
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG2340
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1528782at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	4	3.750