DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8072 and R3hdml

DIOPT Version :10

Sequence 1:NP_648384.1 Gene:CG8072 / 39181 FlyBaseID:FBgn0036070 Length:247 Species:Drosophila melanogaster
Sequence 2:NP_001102432.1 Gene:R3hdml / 366245 RGDID:1305296 Length:253 Species:Rattus norvegicus


Alignment Length:239 Identity:48/239 - (20%)
Similarity:73/239 - (30%) Gaps:83/239 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 KRHIGC-DNNMMFDESCLRFHGLVNMAYFREYLLGLHNGYRQEVASNLFVDLPPAQKMPELVWDN 96
            ||||.. |.|.:.|                     .||..|..|.       |||..|..:|||.
  Rat    55 KRHISARDMNALLD---------------------YHNHIRASVH-------PPASNMEYMVWDE 91

  Fly    97 YLSVVAEYHLKRC-------QMDLPDDSCVATDDFSEPHFNYAEDFYPRPVIRQSNVREMTILAE 154
            .|:..||....:|       |:     :.....:.|               :.....|.:..|.:
  Rat    92 QLARAAEAWATQCIWAHGPSQL-----TKYVGQNLS---------------VHSGRYRSVVDLVK 136

  Fly   155 QWLDEL--------YDLDDIATYSAEGEI----RNIINDRSSYMGCAAGQDYDL------WNIHF 201
            .|.:|.        .|......:...|.:    ..::...||.:|||......:      |....
  Rat   137 SWSEEKRHYSFPAPKDCTPHCPWLCSGPVCSHYTQMVWASSSRLGCAIHTCSSINVWGSTWQQAV 201

  Fly   202 VLVCYYSSGPPVEGNLYEEGIFN----ATLC-PNGQSDEYPNLC 240
            .|||.|:    ::||...|..:.    .:.| |:.|.:...|:|
  Rat   202 YLVCNYA----IKGNWIGEAPYKTGKPCSACPPSYQGNCNSNMC 241

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8072NP_648384.1 CAP_euk 61..208 CDD:349399 32/171 (19%)
R3hdmlNP_001102432.1 CAP_R3HDML 63..208 CDD:349409 34/192 (18%)

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