DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8072 and Crispld1

DIOPT Version :10

Sequence 1:NP_648384.1 Gene:CG8072 / 39181 FlyBaseID:FBgn0036070 Length:247 Species:Drosophila melanogaster
Sequence 2:NP_001128435.1 Gene:Crispld1 / 316482 RGDID:1564813 Length:500 Species:Rattus norvegicus


Alignment Length:250 Identity:56/250 - (22%)
Similarity:75/250 - (30%) Gaps:99/250 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 GKRHIGCDNNMMFDESCLRFHGLVNMAYFREYLLGLHNGYRQEVASNLFVDLPPAQKMPELVWDN 96
            |||.| .||:|                   :.:|.|||..|.:|       .|.|..|..:.||.
  Rat    53 GKRAI-TDNDM-------------------QSILDLHNKLRSQV-------YPAASNMEYMTWDV 90

  Fly    97 YLSVVAEYHLKRCQMDLPDDSCVATDDFSEPHFNYAEDFYPRPVIRQS------NVREMTILAEQ 155
            .|...||...:.|..:....|.:                   |.|.|:      ..|..|...:.
  Rat    91 ELERSAESWAETCLWEHGPTSLL-------------------PSIGQNLGAHWGRYRPPTFHVQA 136

  Fly   156 WLDELYDL--------DDIATYSAEGEI----RNIINDRSSYMGCAA---------GQDYDLWNI 199
            |.||:.|.        |....:...|.:    ..::...||.:|||.         ||   :|..
  Rat   137 WYDEVRDFSYPYEHECDPYCPFRCSGPVCTHYTQVVWATSSRIGCAINLCHNMNIWGQ---IWPK 198

  Fly   200 HFVLVCYY------------------SSGPPVEGNLYEEGIFNATLCPNGQSDEY 236
            ...|||.|                  |:.||..|     |.....||....||:|
  Rat   199 AVYLVCNYSPKGNWWGHAPYKHGKPCSACPPSFG-----GGCRENLCYKEGSDQY 248

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8072NP_648384.1 CAP_euk 61..208 CDD:349399 39/191 (20%)
Crispld1NP_001128435.1 CAP_CRISPLD1 62..207 CDD:349407 39/192 (20%)
LCCL 291..375 CDD:128866
LCCL 394..491 CDD:427521
Blue background indicates that the domain is not in the aligned region.

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