DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8072 and scl-18

DIOPT Version :9

Sequence 1:NP_648384.1 Gene:CG8072 / 39181 FlyBaseID:FBgn0036070 Length:247 Species:Drosophila melanogaster
Sequence 2:NP_502228.2 Gene:scl-18 / 188436 WormBaseID:WBGene00011724 Length:225 Species:Caenorhabditis elegans


Alignment Length:205 Identity:41/205 - (20%)
Similarity:72/205 - (35%) Gaps:49/205 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    64 LLGLHNGYRQEVASNLFVDLPPAQK-----MPELVWDNYLSVVAEYHLKRCQMD---LPDDS--- 117
            :|..||..|.::|...||.....::     :.:.||:..|...|....::....   :||..   
 Worm    41 VLDHHNNIRSQLAFGNFVTKRHTKRAAGSNIKKFVWNATLERSAYSFAQKNPSQHSFIPDIGENL 105

  Fly   118 ----CVATDDFSEPHFNYAEDFYPRPVIRQSNVREMTILAEQWLDELYDLDDIATYSAEGEIRNI 178
                .....||::    |.      |:...|.::|   ..|::.|.....:|:.. |..|....:
 Worm   106 FWHWSTRPGDFNK----YG------PMAALSWIKE---FREKFWDSNILTNDLFG-SGVGHATQM 156

  Fly   179 INDRSSYMGCAAGQDYDLWNIH---------FVLVCYYSSGPPVEGNLYEEGIF----NATLCPN 230
            :...:..||||...   ...||         ..:||:|..    :||...|.|:    ..:.|.:
 Worm   157 VWADTYQMGCAVSH---FKEIHKRTGRPITKICVVCHYWP----KGNYLNEPIYLEGPPCSKCES 214

  Fly   231 GQSDEYPNLC 240
            .:.|:...||
 Worm   215 KKCDKRTGLC 224

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8072NP_648384.1 SCP_euk 61..208 CDD:240180 32/167 (19%)
scl-18NP_502228.2 SCP 37..193 CDD:214553 33/168 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG2340
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1528782at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

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