DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8072 and crispld2

DIOPT Version :9

Sequence 1:NP_648384.1 Gene:CG8072 / 39181 FlyBaseID:FBgn0036070 Length:247 Species:Drosophila melanogaster
Sequence 2:XP_003199065.1 Gene:crispld2 / 100535149 ZFINID:ZDB-GENE-130131-1 Length:508 Species:Danio rerio


Alignment Length:211 Identity:49/211 - (23%)
Similarity:70/211 - (33%) Gaps:66/211 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    61 REYLLGLHNGYRQEVASNLFVDLPPAQKMPELVWDNYLSVVAEYHLKRCQMDL-PDDSCVATDDF 124
            ||.:|.|||..|.||       .|.|..|..::||:.|...|....::||.:. |.|..::....
Zfish    61 REEILKLHNKLRGEV-------YPTASNMEYMIWDDELERSATSWAEQCQWEHGPQDLLMSIGQN 118

  Fly   125 SEPHFNYAEDFYPRPVIRQSNVREMTILAEQWLDELYDLDDIATYSAEGEIRNIINDRSS----- 184
            ...|:..    |..|...          .:.|.||:.|.    ||....|......:|.|     
Zfish   119 LAVHWGR----YRSPAYH----------VQAWYDEVKDY----TYPYPHECNPWCPERCSGPMCT 165

  Fly   185 -----------YMGCAA---------GQDYDLWNIHFVLVCYYSSGPPVEGNLYEEGIFN----A 225
                       .:|||.         |   ::|.....|||.||.    :||...|..:.    .
Zfish   166 HYTQLVWATTNRVGCAVHVCPRMNVWG---EIWENAVYLVCNYSP----KGNWIGEAPYQHGRPC 223

  Fly   226 TLCPNGQSDEYPNLCK 241
            :.||    ..|..:|:
Zfish   224 SQCP----PSYGGVCR 235

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8072NP_648384.1 SCP_euk 61..208 CDD:240180 40/172 (23%)
crispld2XP_003199065.1 SCP_euk 61..206 CDD:240180 40/172 (23%)
LCCL 299..382 CDD:128866
LCCL 402..495 CDD:281766
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170585809
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG2340
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1528782at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.750

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