DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8072 and r3hdml

DIOPT Version :9

Sequence 1:NP_648384.1 Gene:CG8072 / 39181 FlyBaseID:FBgn0036070 Length:247 Species:Drosophila melanogaster
Sequence 2:XP_017953344.1 Gene:r3hdml / 100492715 XenbaseID:XB-GENE-1011048 Length:253 Species:Xenopus tropicalis


Alignment Length:208 Identity:43/208 - (20%)
Similarity:68/208 - (32%) Gaps:68/208 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    64 LLGLHNGYRQEVASNLFVDLPPAQKMPELVWDNYLSVVAEYHLKRCQMDLPDDSCVATDDFSEPH 128
            ||..||..|.:|       .|||..|..:|||..|:..||....:|:.                 
 Frog    66 LLDYHNQVRSKV-------FPPAANMEYMVWDERLAKSAESWANQCKW----------------- 106

  Fly   129 FNYAEDFYPRPVIR---------QSNVREMTILAEQWLDELY--------DLDDIATYSAEGEI- 175
                 |..|..::|         ....|.:..|.:.|.||..        :.:........|.: 
 Frog   107 -----DHGPNQLMRYIGQNLSVHSGRYRSIVDLVKGWYDERQHYSFPHPRECNPSCPNKCTGAVC 166

  Fly   176 ---RNIINDRSSYMGCAAG--QDYDLWNIHF----VLVCYYSSGPPVEGNLYEEGIFN----ATL 227
               ..::...|:.:|||..  .:.::|...:    .|||.||    ::||...|..:.    .:.
 Frog   167 THYTQMVWASSNRIGCAVNICTNINVWGSTWRQASYLVCNYS----IKGNWIGEAPYKLGRPCSA 227

  Fly   228 CPNGQSDEYPNLC 240
            ||    ..|..:|
 Frog   228 CP----PSYGGVC 236

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8072NP_648384.1 SCP_euk 61..208 CDD:240180 34/170 (20%)
r3hdmlXP_017953344.1 CAP_R3HDML 63..208 CDD:349409 34/170 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1528782at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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